Sphingobacteriaceae bacterium GW460-11-11-14-LB5: CA265_03645
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Entry
CA265_03645 CDS
T05546
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
sbx
Sphingobacteriaceae bacterium GW460-11-11-14-LB5
Brite
KEGG Orthology (KO) [BR:
sbx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbx01002
]
CA265_03645
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbx01011
]
CA265_03645
Peptidases and inhibitors [BR:
sbx01002
]
Cysteine peptidases
Family C82
CA265_03645
Peptidoglycan biosynthesis and degradation proteins [BR:
sbx01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
CA265_03645
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Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
DUF3422
Motif
Other DBs
NCBI-ProteinID:
ARS38824
UniProt:
A0A1X9Z1J8
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All DBs
Position
870738..872300
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AA seq
520 aa
AA seq
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MKKFRFLILPFILFISACGWFKSPPEIGKVLSEHFKNKIYKDFDTVAYDSIFVKTMDSLS
GKFVNPKTIKAFYADNYAQPKLVTQFYINGELDSLVNYLDQSEVHGFNPKIFKGDEIKSL
LAVLTANKFKKVEESYPVIAKLELLSANAYLNYNNYLKYGVVNPRTIFSRYYIKVRRPDS
LGMSNLLNGKSLVDTLRSVQPKSVQYKALQSAYLNADAESEKRILLLNMERFRWKMPETG
DNYVQVNIPDFRLTWLDKTDTVITMKVCVGGKRENGYEDKLKAFAKSGNLDDKPKNHETP
LLFSKINSIQANPIWNIPVSIAQSEIYWMARKDPYYLSNSNIKVYYKDKLIGEPDTINWN
RYSRDKLPFKFKQGSGGGNALGKFKFIFDNSSSIYLHDTNNKNGFNLSNRAISHGCVRIE
KPLEFAELLVKDSYTYDKLRAEVDLPPIDSTHVKWYKKRMAQKADTLKTFQLKPAWFAPK
KNVPLIITYITAWAQNDRIEYRPDVYGMDEKLWVAMKKFR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagttccgctttctaattctgccctttattttatttatttctgcctgtggatgg
tttaaaagcccaccagagattgggaaagtactgtctgaacattttaagaataaaatctac
aaagatttcgatactgtagcttatgatagcatttttgtgaaaacaatggacagtctttcg
ggtaaattcgttaatccgaaaactattaaagctttttatgccgataattatgctcaacct
aagctggttacacaattttatattaatggtgagctggattcgttagtgaactatttagat
cagagtgaggtgcatggctttaatccaaagatttttaaaggagatgaaattaaaagcttg
ttagccgtattaacagccaataagtttaaaaaggtagaggaaagttatcccgtaatcgcg
aaattagagttattgtcggctaatgcttatctgaattataataattaccttaaatatggg
gtggtaaatccccgcaccattttttcacgttattacattaaagttaggcgtccggatagc
ttaggaatgtctaatcttttaaatggtaaaagtcttgtggataccttaagatccgttcag
ccaaaatcagttcagtataaagcattgcagtcggcctatttaaatgcagatgctgaaagt
gagaagcggattttactgttgaacatggaacgtttccgctggaaaatgccggagaccgga
gacaattatgtgcaggtaaatattcctgattttaggttgacctggctggacaaaaccgat
acggtaattacgatgaaagtttgtgtgggtgggaagcgtgaaaacggttatgaagataag
ctaaaagcctttgcaaaatctggtaatttagatgacaaaccgaagaaccatgagacgcct
ttattgttcagtaaaatcaactccattcaggccaatccgatctggaatattccggtaagt
attgcgcaaagtgagatctattggatggctcgaaaagatccatattatttatcaaatagc
aacatcaaagtttactataaagacaaactaattggtgagcctgataccatcaattggaac
aggtattcgcgtgataaattaccctttaaatttaaacaaggatctggtggaggaaacgct
ttaggaaagttcaaatttatcttcgataacagctcgagtatttacctgcacgataccaat
aacaagaacggttttaacttaagcaatcgggcaatcagtcatggttgtgttcgtattgag
aagcctttggaatttgccgaacttttggtgaaagattcttacacttatgataaactcagg
gctgaagtagatttgccgccgatagatagtacacatgtaaaatggtataaaaaacgcatg
gcacaaaaggctgatacgcttaaaacttttcaattaaaaccagcttggtttgcgccaaag
aaaaatgttccgttaattattacctatatcacggcatgggctcaaaacgataggatcgaa
tacaggcctgatgtttatggcatggacgaaaaactttgggttgcgatgaagaagtttagg
tag
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