Sphingobacteriaceae bacterium GW460-11-11-14-LB5: CA265_06550
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Entry
CA265_06550 CDS
T05546
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sbx
Sphingobacteriaceae bacterium GW460-11-11-14-LB5
Pathway
sbx03030
DNA replication
sbx03430
Mismatch repair
sbx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CA265_06550
03430 Mismatch repair
CA265_06550
03440 Homologous recombination
CA265_06550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbx03032
]
CA265_06550
03400 DNA repair and recombination proteins [BR:
sbx03400
]
CA265_06550
Enzymes [BR:
sbx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CA265_06550
DNA replication proteins [BR:
sbx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CA265_06550
DNA repair and recombination proteins [BR:
sbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CA265_06550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
Motif
Other DBs
NCBI-ProteinID:
ARS39329
UniProt:
A0A1X9Z2I8
LinkDB
All DBs
Position
1617932..1620946
Genome browser
AA seq
1004 aa
AA seq
DB search
MFLNVHSSYSLKYGTLNIEQLIATARNLGIHQMVLTDINNSTGAVEFIRECYKQGIAKEA
DEIHKGNIPYQIKPVAGIEFRVDHKLLYVGVAKNREGMRELNEFLSHHNINHIPLPQIPP
EMENVYIIYPFQKSFNTVLKGNEFIGIRAKQLNLLYKHPLLKQKEKLLVWHPVTISDKIT
YRLHQYLRAIELNTLLTKVPDEQKCDPDEFLIPEVELTQQFEQYPFIVQNTQRLLNSCDL
SVYFEDGPAPVSKNKFFYTGDFEGDKKMLRELAEEGLRYRYGENNTEAIERLEKELRIIE
LKNFCAYFLITYDIVRYAMTECGFYHVGRGSGANSIVAYCLRITDVDPIDLDLYFERFLH
EKRTSPPDFDIDFSWDEREVIQRYIFERYPKWHVAFLGTMSTFKDRAIIREIGKVLGLPK
GEIDSFTDPTKERENLLNATYQKLLAVYQYMKGMPNQRSIHAGGILISEEPITYYTALDM
PPKGFPTVQWDMYEAEAIGYEKFDILSQRGIGHIREAVQLIKKNKAKDIDIHDFKTFKND
QKLNGILKEGQPIGCFYIESPAMRQLLKKLKCDNYLTLVAASSIIRPGVASSGMMKAYIE
RYHAPEKVVYLCEVMKQRLSETYGVMVYQEDVIKVCHYFAGLDLADADVLRKAMSGKYRS
KLAFDELVNKFFASARKEGHSEELITEVWRQISSFAGYSFSKAHSASFAVESYQSLYLKT
YYPMEFMVAVLNNYGGFYSRWVYVHELQKTGARVHLPCVNHSDDVVNIKGEDAYLGFIAV
QGLEEKNIKIIPAERHTNGLYIDLEDFVKRTCISLEQAIILIRLGALRFTGKDRKTLLWD
VHNYLGFKQKKVNHAELFKLSYKTYQLPELADSELENAYTELELLGYPLNYDMFDFLKTP
YRGDTMAADMHKHLGKTVRMVGNYVCEKTVHTIKNTKMWFGTFLDANGDFFDTTHFPNTT
PMYPFKGKGCYLILGKVVEDFGFQSIEVLKFAKLDIQMNPVAID
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaaatgtgcactcttcttatagcctgaaatatggtacactgaacatcgagcag
ttgattgccactgcccggaatttgggtatccatcaaatggtactcaccgatatcaataat
tcaaccggtgcggtagagtttattcgcgagtgttataaacagggcattgccaaagaggcc
gacgagatccataaaggcaatattccctatcagatcaaaccggtagcagggatcgagttt
cgggtcgatcataaattgttgtatgtgggcgttgctaagaatagagagggaatgcgcgag
ctgaatgagtttttaagccaccataacatcaaccatattcccttgccgcaaattccgcct
gaaatggaaaatgtgtatatcatttatccctttcaaaaatcgtttaacactgtactaaaa
ggtaatgaatttataggcatccgtgccaaacagctcaaccttttatacaaacatccactt
ttaaaacaaaaggaaaaactgctggtttggcatcctgttaccataagtgataagatcacc
taccgtttgcaccaataccttagggcaattgaactcaatacacttttaactaaggtaccc
gatgaacaaaaatgcgatccagatgaattcctgattccggaagtggaattaacgcagcaa
tttgaacagtaccctttcattgttcagaatacccagcgtttgttgaacagttgcgattta
agtgtttattttgaggatggccctgcacctgtttctaaaaacaagtttttttataccggg
gatttcgaaggagataaaaaaatgcttcgggagcttgccgaagaagggctcaggtaccgt
tatggcgaaaataatacagaagccattgagcgtttggaaaaagaactgcgcatcatcgaa
cttaaaaacttctgtgcttatttcctcatcacctatgatattgtacggtatgcgatgacc
gaatgcggtttctaccatgttggccgtggctcgggtgccaacagcattgtagcctattgt
ttgcgcattaccgatgtagatccgattgatctcgacctgtatttcgaacgtttcctgcac
gaaaaacggaccagcccgccagattttgatatcgatttctcctgggatgaaagggaggta
atacaacggtatatctttgaacgctatcctaaatggcacgttgcttttttgggtaccatg
agtacttttaaagaccgggcaattatcagggaaatcgggaaggtgctgggtttacccaaa
ggtgaaatagatagttttaccgatcccaccaaagaacgcgaaaacttactcaatgccact
taccaaaagttattggcggtgtatcaatatatgaaggggatgcccaaccagcgctctatc
catgccggggggattttgatttcagaagagccgattacctattataccgcattggatatg
ccgccaaaaggttttccaaccgtacagtgggatatgtacgaagccgaagccattggttac
gaaaaattcgatattttaagtcagcggggtatcgggcacatccgcgaagctgtacagctc
atcaaaaagaataaagcaaaggatattgatatccacgattttaaaacctttaaaaatgat
cagaaattgaatggcattcttaaagaggggcagcctatcggctgtttttatatcgaatcg
ccagccatgcggcaattgctcaaaaaactgaaatgcgataattaccttaccctggtagca
gccagttctattatccgtccgggggtggccagctcaggcatgatgaaagcctatatcgaa
cgctatcatgcacccgaaaaagtagtttacctctgcgaagtgatgaaacagcggctcagc
gaaacctatggggtaatggtttaccaggaagatgtaatcaaagtatgccattattttgca
ggcctcgatctggccgatgccgatgtcctccgtaaagccatgagtggaaaataccgttcg
aaactggcttttgatgaattggtaaataaattttttgcctcagccagaaaggaaggccat
tcagaagaactgattaccgaagtttggcgacagatatcctcttttgccggctacagcttt
tctaaagcccattctgcttcttttgcggtagaaagttatcagagtttatacctcaaaacc
tattaccccatggaatttatggtcgccgtactgaataactatggtggcttttacagtcga
tgggtttatgtgcatgagttacaaaaaaccggggcacgtgtgcatttgccttgtgtgaat
cacagtgatgacgtagtgaatataaaaggcgaagatgcttatctgggttttattgctgtt
cagggtttagaagaaaaaaacatcaaaattattcctgctgaacgtcatacaaatggtttg
tacatcgatctcgaagattttgtaaaacggacctgtatctcattagaacaggctattatt
ttaattcggctgggtgctttacgatttaccggaaaagatcggaaaaccctgctttgggat
gtacacaactaccttggctttaagcagaagaaagtgaaccatgccgaactttttaaactg
agttataaaacttaccagctgccggaactggctgattcggaactggaaaatgcttataca
gagttagagttattgggttatccgcttaattacgatatgttcgattttttaaaaacgcct
taccgtggcgataccatggccgctgatatgcacaaacatttgggtaaaacggtaaggatg
gtagggaactatgtttgcgaaaaaacggtacacaccattaaaaataccaaaatgtggttc
ggtacttttttagatgccaacggcgattttttcgataccacccattttcccaataccaca
cccatgtatccttttaaaggaaagggctgttacctgattttgggcaaggtggttgaagat
tttggttttcaaagtatagaggttttaaaatttgccaaattggatattcaaatgaacccg
gtagcaattgattaa
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