Sphingobacteriaceae bacterium GW460-11-11-14-LB5: CA265_07560
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Entry
CA265_07560 CDS
T05546
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sbx
Sphingobacteriaceae bacterium GW460-11-11-14-LB5
Pathway
sbx03030
DNA replication
sbx03430
Mismatch repair
sbx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CA265_07560
03430 Mismatch repair
CA265_07560
03440 Homologous recombination
CA265_07560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbx03032
]
CA265_07560
03400 DNA repair and recombination proteins [BR:
sbx03400
]
CA265_07560
Enzymes [BR:
sbx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CA265_07560
DNA replication proteins [BR:
sbx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CA265_07560
DNA repair and recombination proteins [BR:
sbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CA265_07560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
GIY_YIG_2
DEDDh_C
DNA_pol_A_exo1
DNA_pol_D_N
Motif
Other DBs
NCBI-ProteinID:
ARS39514
LinkDB
All DBs
Position
complement(1900214..1901587)
Genome browser
AA seq
457 aa
AA seq
DB search
MLYAVVDIETTGGHASANGITEVAINIHDGNQIVESYTTLINPKQAIPAYITALTGIDDH
MLMDAPTFDDVALQIYQLLNDKIFVAHNVNFDYSFLKHHLAAAGYDLQCKKLCTVRLSRK
LIPGKSSYSLGKLCTALQIPIQNRHRAAGDADATSILFNLLLEHDQEGTIAEMLKKTSKE
QVLPPHLDKACILRLPNQPGVYYFKDSKGKIIYVGKAKNLKKRVTSHFTGNTPNRQRQDF
LRTIHHVDYVICGTELMALILEANEIKRLWPENNRAMKRYEHKYDLYVFEDQNGYLRLAI
DKHKKNNNALQSFNSLLEGYNFLNQLVDKYQLCAKLCYLQKTATKCYAHENGQCFGACSG
IETVAVYNKKLNAALSDIQNQQPSFALVDEGRKEEEFSCLVVEKGKFYGMGYFTDKNYLS
DGLAPIKNDLSIYPSNSYILNLILNYAEQHPQKLYKL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgttatacgcagttgtagatattgaaaccactggcggccatgcctcagcaaatggtatt
accgaggttgccattaacatccatgatggcaatcaaatagttgaatcatacactaccctg
attaatcctaagcaagctatacccgcttacattacggcacttaccggtattgatgatcac
atgttaatggatgccccaacttttgatgacgtggcattacagatttatcaactgttaaat
gataagatttttgtagctcacaatgttaacttcgattattcctttttgaagcatcatttg
gcagccgcaggatacgatttacagtgtaaaaaactgtgtacggtgcggttgagcagaaaa
ctaataccaggaaaatcttcgtatagcctgggtaaactctgtacagctttgcagattccg
attcaaaaccggcaccgggcagcaggagatgcagatgctacaagtatccttttcaattta
ttactggaacacgatcaggaaggtaccatagcagaaatgctgaagaaaacatcaaaagag
caggttttaccgcctcatttagataaagcctgtattttgaggttgcccaatcagcctggt
gtatattattttaaagatagtaagggcaaaattatttatgttggaaaagcgaaaaacctg
aagaaacgtgtaaccagccactttacaggtaatacacctaaccggcagcgtcaggatttt
ttacgcacaattcatcacgtagattatgtaatttgtggtaccgaactgatggctttaatt
ttagaagccaatgaaattaaacgcctctggccggaaaataaccgcgccatgaaacgttat
gagcataaatatgatttatatgttttcgaagatcaaaacggttatttacgtttagccatt
gataaacataaaaagaacaataacgccctacagagtttcaatagcttgttggaaggctat
aatttcttaaaccaactggttgataagtaccagctttgtgcaaagctttgttatttgcaa
aaaacggcaaccaaatgttatgcccatgaaaatggccaatgttttggtgcatgcagtggc
atagaaaccgtagccgtttacaacaaaaaactaaatgcggcattaagcgacattcaaaac
cagcaacccagttttgcattggtagatgaaggcagaaaagaggaagaatttagctgcctg
gtggtggaaaagggaaagttttatgggatgggttattttacagataaaaattatttatca
gatggcctggctcccattaaaaatgatttatctatctatccatccaacagttatatttta
aatttaattctcaattacgcagaacaacatccacagaaattgtataaattgtag
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