Sphingobacteriaceae bacterium GW460-11-11-14-LB5: CA265_07975
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Entry
CA265_07975 CDS
T05546
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sbx
Sphingobacteriaceae bacterium GW460-11-11-14-LB5
Pathway
sbx00040
Pentose and glucuronate interconversions
sbx01100
Metabolic pathways
sbx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sbx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CA265_07975
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CA265_07975
Enzymes [BR:
sbx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CA265_07975
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pectate_lyase_5
Gp77
Motif
Other DBs
NCBI-ProteinID:
ARS42926
UniProt:
A0A1X9ZCC5
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Position
1989421..1990794
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AA seq
457 aa
AA seq
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MSLIGLMLTTIIFFSNCKKSVKADDALADSTELFSGDSTSVLAATSGSTGKLSLSGVKSE
GGYAYKISQSISGGDNSTSKEQSILRLFEDGVEIGPAHSLHDDIRNLGKGRFSHWGSTVI
FSASDNTDPRTNGRSYTYLMGGTSAALPPAETVTPPPTNTTINAALVGYALVNGKTTGGQ
GGVETTVTTLDQLKAAVGDNVTRTIYVSGTIKGAGKDIVYVKSNKSIIGRSGAVIEGVNL
FIYTVSNIIIQNITFKNYVEQAAVQIKDAAHHVWVDHCDFSTDRSHGWEYWGKDICITRE
SDYVTVSWSKFHDTNLSVLISGGIEGHEADKGKLHVTMHHNMWYNITEREPSMNYGSVHM
FNNYHLNNSGYSIGTRAGGIVRTDNEYFSNCVKPLTTKVASDPEGYFSGITTNIYDKCGA
NNITTAVSTWVPEYDYKSFLNDAASVPAIVTANAGAR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgagtttaattggtttaatgttaacgacgattattttctttagtaattgtaaaaaaagt
gtaaaggctgatgatgcattggccgacagtacagaattgttttcaggcgattcaacatca
gtattagccgccaccagtggcagtactggtaaattaagcctttcaggagtaaaatctgag
ggaggttatgcttataaaatttcacaatcaatttcaggcggcgacaattctacttcaaaa
gagcaatcgattttaaggttatttgaagacggagtagaaattggtcctgcccatagttta
cacgatgatatcaggaatttaggaaaaggcaggtttagccattggggtagtacagtaata
ttttcagcatctgacaataccgacccaagaaccaatggccgttcatatacttatttaatg
ggcggtacaagtgctgctttaccaccggcagaaacggtaactcctcctccaacaaataca
actattaatgcagccttagtaggttatgctttggtaaatggtaaaacaacaggtggccag
ggtggtgttgaaactacggtaaccacgcttgaccagttaaaagctgccgttggtgataac
gttacacgtactatttatgtgagcggtaccattaaaggtgctggtaaagatatcgtatat
gtaaaatcaaataaatctattattggcagatctggtgctgttatcgaaggtgtgaattta
ttcatttacacagtaagtaacatcatcatccagaacattacctttaaaaattacgtagaa
caggcagccgtgcaaattaaagatgctgctcaccacgtttgggttgaccattgcgatttc
tctacagaccgtagccatggctgggaatattggggtaaagatatttgcattaccagagaa
tctgattatgtaacggtttcctggagcaaatttcacgataccaatttatcggtgctaatt
agtggaggtatcgaaggtcacgaagctgataaaggtaaattacacgtaacgatgcaccat
aacatgtggtacaacattacagagagagagccatcaatgaactatggtagtgtgcacatg
tttaacaactatcaccttaacaactctggttactctatcggtacaagagcaggtggtata
gtaagaacagataatgagtatttctcaaattgtgttaaaccattaactacaaaagtggca
agtgatccggaaggatattttagcggtattaccaccaacatttacgataaatgtggtgca
aacaatataacgacggcagtttctacctgggttccagagtatgattacaaatcattcctt
aacgatgcagcaagtgtgcctgctattgttacggcaaatgctggtgccagatag
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