Sphingobacteriaceae bacterium GW460-11-11-14-LB5: CA265_08220
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Entry
CA265_08220 CDS
T05546
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
sbx
Sphingobacteriaceae bacterium GW460-11-11-14-LB5
Pathway
sbx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CA265_08220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbx03400
]
CA265_08220
DNA repair and recombination proteins [BR:
sbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CA265_08220
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
ATPase_2
AAA_27
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ARS39634
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Position
2036858..2039470
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AA seq
870 aa
AA seq
DB search
MAKDTNKETPLMQQYNAIKAKYPGALLLFRVGDFYETFGEDAIKTAQILGIVLTRRGTGP
NGGALELAGFPHHSLDNYLSKLVRAGQRVAICDQLEDPKTTKTIVKRGVTELVTPGVAYG
DNIVNQKSNNFLACVFFDKTQLGVSFLDISTGEFLIAQGNSDYIDKLLQGFKPTEVIFQK
SKRQAFTENFGDRFYTFGLDEWPFTSDFGNETLMKHFEVSSLKGFGVERLQSGIVAAGVI
LHYLGETEHRNLQHISSIGRIEEDRYMWLDRFTIRNLELVNSPNDNAVTLFDILDHTCTP
MGARLLQKWIIMPLKELKPIQERLGMVEYFVKHEELQGEFLSNIKQIGDLERLISKVGLQ
RVGPRELVALKRALYHIEAVKKLAADSKNPFLIKIADQLNPCLAIRERIERELQPDPPAL
LIKGNVIADGIDEDLDRLRKIAFGGKDYLVQIQKREAEATGIPSLKIAFNNVFGYYLEVT
HTHKDKVPAGWIRKQTLVNAERYITPELKEYEDQILGAEEKIQAIEIRLYNELMYETASY
IKPIQLDSFLIAQLDCLLCFAQLAAKNHYNKPKVTENKVLDIKGGRHPVIEKQLPVGQEY
ITNDVYLDTDSQQIIMITGPNMAGKSAILRQTALIVLMAQMGSFVPAKDAEVGIVDKIFT
RVGASDNISSGESTFMVEMNETASILNNISDDSLILLDEIGRGTSTYDGISIAWAIAEFL
HQHPTARPKTLFATHYHELNELANTMPRIKNFNVSVKEMTNKVIFLRKLVPGGSEHSFGI
HVAKMAGMPTKLIGRANEILKKLEIDRTEGQSIKDSIKKVQNQAYQLQMFAIDDPVLVKI
RDTLNNLDVNALTPVEALLKLDEIQRLIKN
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaagacacgaataaagaaaccccgttaatgcagcaatacaacgcgattaaagcg
aagtatccgggcgcacttttactatttagggttggcgatttttatgaaacgtttggcgaa
gatgccattaaaacggcacagattttaggcatcgtattaaccagaagaggtaccggccct
aatggcggtgctttagaactggctggctttccacatcattctttggataactacttatct
aaactggtgagggcaggacaacgcgtggccatttgcgatcagctcgaagatcctaaaact
acaaaaactattgttaaacgtggtgtaacagaattggttacgcccggagtagcttacggt
gataacatagtcaatcagaaatcgaacaatttccttgcctgtgttttctttgataaaaca
caactgggggtttcatttttagatatatcaacaggtgaatttctaattgcacaaggtaac
agcgattatattgataaacttttgcagggttttaagccaacagaggttatttttcagaaa
tcgaaacgccaggcctttaccgagaacttcggcgatcgtttttacacctttggtttagac
gaatggccttttacaagcgatttcggaaacgaaacgctgatgaaacacttcgaggtttct
tcgttaaaaggttttggtgtagaacgtttgcagagcggaattgtagctgcaggtgtaatt
ttacactatctgggcgaaaccgagcaccgtaatctgcagcatatcagttcaataggtcgt
attgaagaagaccgctacatgtggttagatcgctttacgatccgtaacctggagctggta
aattcgccgaacgacaacgccgtaaccttgttcgatattctggatcatacctgtacgcca
atgggtgcacgtttgttgcagaagtggattattatgccattaaaagagttgaagcctatt
caggaacgtcttggtatggtggagtattttgtaaaacatgaagagctacaaggggaattt
ttaagtaacattaaacagattggcgatttagaacgactgatttctaaagttggtctgcaa
cgtgttggtccgagagaattagtcgcattaaaacgtgcactttaccatattgaagccgtt
aaaaaactggctgccgattctaaaaatcctttcctgattaaaatagcggatcagttgaat
ccatgtttggccattagggaaagaattgaaagggaattgcagcctgatccaccggcattg
ctgattaaaggaaatgtaattgccgacggcattgatgaagatttagaccgtttgcgtaaa
attgcctttggtggtaaggattacctggtgcagatacagaaacgtgaagcagaagcaacc
ggaatcccatctttaaaaattgccttcaacaatgtttttggttactatttagaggttaca
catacccacaaagataaagtgccggcaggctggatccgtaaacaaacgctggtaaatgcc
gagcgttacattacaccggagcttaaagaatacgaagatcaaattttaggtgcagaggaa
aagatacaagccattgaaatccgcctgtataatgaactgatgtacgaaacagccagttac
attaaaccgatccagctcgattcgtttttaattgcacagcttgattgtttattgtgtttt
gcacaattggcggctaagaatcattataacaaacctaaggttaccgaaaataaggtgctt
gacattaaaggtggccgtcacccggtaattgaaaaacaattgcctgtagggcaggagtac
atcactaatgatgtgtatctggataccgatagtcagcaaattattatgattaccggaccc
aacatggcgggtaagtcggccattttaagacaaaccgcgctgattgtattgatggcacaa
atgggctctttcgttccggctaaagatgctgaagtaggtattgtagacaagatatttacc
cgcgtaggggcatctgataatatttcttcaggagaaagtacattcatggtcgaaatgaat
gagactgccagtattttgaataatatttcggatgatagtttgattttactcgatgaaatt
ggtcgcggaaccagtacctatgatggtatttcaatcgcctgggccattgccgaattttta
caccagcacccaaccgcgcgaccaaaaacattgttcgccacgcactaccatgagctaaac
gaactggccaataccatgccgcgcatcaaaaactttaatgtatcggtaaaagaaatgacc
aataaggtaatctttttacggaagctggttccaggtggcagtgaacatagttttggtata
cacgtagcgaaaatggcggggatgccaacaaaattaattggtcgtgcgaatgagatcctg
aaaaaactggaaatagacagaaccgagggacaaagcattaaagacagtattaaaaaagtg
cagaaccaggcttatcagttacagatgtttgccatcgatgatcctgttctagtgaaaatc
cgtgatacgctgaataatttggatgtaaatgcgttaactcctgttgaagctttgcttaaa
ttggacgaaatacagcgattgattaagaattag
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