Sphingobacteriaceae bacterium GW460-11-11-14-LB5: CA265_09590
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Entry
CA265_09590 CDS
T05546
Name
(GenBank) RNA helicase
Organism
sbx
Sphingobacteriaceae bacterium GW460-11-11-14-LB5
Pathway
sbx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CA265_09590
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Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
AAA_11
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ARS39887
UniProt:
A0A1X9Z3S8
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All DBs
Position
complement(2370953..2372251)
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AA seq
432 aa
AA seq
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MSLDKLKLSKPLVAAMTDAGFLTPKEIQARTMSRILGGQDVIAVGPEGSGKTTTYVLATL
MKLKYAFEEAPRALILVPDAEHVDHVLEQFKLLNRNSTFRILGIDSRGAVDTQMNEITDG
CDIIVAVPDRARALYLKLALNTNKIQLFIVDNAELIVKKGLQLPVVELANSAYKSQHVVF
TEVMHEKLNHMISPFMKDSTTTIEVDEIGEKQAEVYQQMLYQVPNFRTKLNLLTLLLNDT
EVFDKVVVFVNTRLTAQTVYKNFNQHKEGEISIYRSLFFDDKGYDDIEDFKDNPDARVLI
VANENLGELNIEGIPFILHFELPEQKETLIQRIVKHGDEDVVAITFSTDIELIEVKKIEQ
AIGQKLEVMELPEDLKVVDAAAKPKKKKGAEEDETSERGAAFHEKKASNLKNYNYSAGTK
AKMTYKNKKGLS
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
gtgtctttagataaattaaaactcagcaaaccacttgtagcggccatgactgatgcagga
tttttaacgccaaaagaaatccaagccagaacaatgtcgcgcattttaggtggacaagat
gttatagcggtaggaccagaggggtcgggaaaaacaacaacttatgttttagctacttta
atgaagttgaagtatgcatttgaggaagcaccaagagctttaattttagtgccagatgca
gaacatgtagatcatgttttggagcaatttaaattattgaaccggaacagtaccttcagg
attttaggaattgacagccgtggtgctgttgatacacaaatgaatgagattacagatggc
tgtgatattattgttgcagtgcctgaccgggctcgtgcattgtaccttaaattagcctta
aataccaataaaatacaattgttcattgtagataatgcagagcttattgttaaaaaaggc
ttacagttgccggttgtagaattagccaacagcgcttataagtctcagcatgtggtgttt
actgaggttatgcacgagaaactgaaccatatgatttcgccttttatgaaagattctact
accacaattgaagtagatgaaattggcgaaaagcaagcggaagtttatcagcagatgctt
tatcaggtgcctaatttcaggaccaaacttaacctgttaactttattattaaacgatacc
gaagtttttgataaagtggtggtttttgtcaatacacgtttaaccgcacaaacagtttac
aagaactttaatcagcataaggaaggggagatcagtatttaccgttcgctgttttttgat
gataaaggttatgatgatattgaagactttaaagataatccggatgcaagggttttaatt
gtagccaacgagaatttaggcgaacttaatattgaagggattccttttatcctgcatttt
gaattacctgagcagaaagaaacactaattcagcgcattgttaaacatggcgatgaagat
gtggtggccattacattttctaccgatatcgaattgattgaggtgaaaaaaattgagcaa
gccattggtcagaaattggaagtaatggaattacctgaagatttgaaagtagttgatgca
gccgcgaaaccgaagaaaaagaagggtgctgaagaagacgaaacttccgaacgaggtgct
gcttttcatgaaaagaaagccagtaatttaaaaaactacaattacagcgcgggtacaaag
gccaaaatgacttataaaaataagaagggcttgtcttaa
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