Sphingobacteriaceae bacterium GW460-11-11-14-LB5: CA265_11340
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Entry
CA265_11340 CDS
T05546
Name
(GenBank) heparinase
KO
K19052
heparan-sulfate lyase [EC:
4.2.2.8
]
Organism
sbx
Sphingobacteriaceae bacterium GW460-11-11-14-LB5
Brite
KEGG Orthology (KO) [BR:
sbx00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CA265_11340
Enzymes [BR:
sbx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.8 heparin-sulfate lyase
CA265_11340
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GFIT
Motif
Pfam:
Hepar_II_III_N
Hepar_II_III_C
Motif
Other DBs
NCBI-ProteinID:
ARS40213
UniProt:
A0A1X9Z5F0
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Position
2810591..2812543
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AA seq
650 aa
AA seq
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MNIRKKISLCFLLTAGLFANAQDAPLTKQSFDNINLAYPGLEKVNKQFLLGQYDNAGKEL
LSYYRNKANKSEIIKNKTLNSGDKESADNALVHKFKPQKGYGFFDYGKDINWQFWPVKDN
EVRWQLHRVKWWQSLGKAFNSTGDEKYAKEFIFEFGDWAKKNPLGLSKDNDSFAWRPLEV
SERVNIFPAIFDLTVNAQSFTPAFLLEFLNSFSFQADYVPKNYSELGNHLLFEAQRVVGA
GSQFPELKNAPAWRKSGITVLNKEIEKQVFNDGMQWEMSPSYHIASIGIFLNAYRAAQVS
GQEKEFPSSYIAKIEKMVLATANFSFPDYTAPMFGDSWPGDKNGMMKNYADWGKNFPDNQ
SIAYFATDGKKGTAPDYLSKGLPNAGFYTFRNGWKSDATVMTLKAGPPGEFHAQPDNGTF
ELWVKGRNFTPDAGCYLYSGDAEIMKKRDWFRQTRVHSTLTLDNKNMVITKATQNKWEAS
KPMDVLTYTNPSYTGLNHQRSVLFINQKYFLIIDQAIGKATGTLGTHFQLKEDSKPVFDK
AKNSVYTTYADGNNLLIQNLNSDQVSLSEEEGKVSYVYMKEISRPAFVFEKAKSDAKTQN
FVSILYPFDGDKAPVITVKENEGNDFEKGNLNLTLSIDGKKSEVKVALMK
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcagaaaaaaaatatcgctttgcttcttactgaccgctggcctatttgcaaac
gcacaagatgcaccgcttaccaaacaaagttttgacaacatcaacctcgcctaccccggc
ttagaaaaagtaaacaaacaatttttgttgggccaatacgataatgcaggtaaagaatta
ttgagctattaccgcaacaaggcaaacaagagcgaaatcattaaaaacaaaacactaaac
agtggcgataaggaaagcgcagacaatgctttagtgcacaaatttaagccacagaaaggt
tatggatttttcgattatggtaaagatattaactggcagttttggccggtaaaagataac
gaggtccgctggcagttacaccgcgtaaagtggtggcaatcgctaggtaaagcctttaat
agcactggagatgaaaaatacgccaaagaatttatcttcgagtttggcgattgggctaaa
aaaaatccgctgggtttatcaaaagacaatgacagttttgcctggcgccctttagaggta
tcagaaagggtaaacatatttccggctatttttgatctgacggtaaatgcacaaagtttt
acacccgcatttttattggaatttctaaacagtttcagtttccaggcagattatgttcct
aaaaattacagcgagctgggaaaccatttattattcgaagcccagcgtgttgtgggtgca
ggttcgcaattccctgagctaaaaaatgcaccggcctggagaaaaagtggcattaccgtg
ctaaataaggaaattgaaaaacaagtatttaatgatggtatgcagtgggaaatgtcgcca
tcgtaccatatcgcttcaattggtatttttttaaatgcatatcgcgctgcacaggtaagc
ggacaagaaaaggaatttccgtcgagttatattgctaaaatagagaaaatggtattggct
acggctaacttttccttcccggattatactgcccccatgtttggcgatagctggccggga
gataaaaatgggatgatgaaaaactatgctgactggggcaaaaactttcctgataaccaa
agtattgcttacttcgcaactgatggcaaaaaaggtaccgcgcctgattatttgtcgaaa
ggtttgccaaatgcaggcttttatacatttagaaacggatggaaaagcgatgcaacggta
atgactttaaaagcaggtcctccgggagaatttcatgcccagcctgataacggaaccttc
gaactttgggtaaaaggccgcaattttacgcccgatgccggttgttacctctacagcggt
gatgccgagatcatgaaaaaaagagactggttccgccaaacccgtgtacacagcacactt
acactggacaataaaaacatggtgattaccaaagccacccagaacaaatgggaagccagt
aaaccaatggatgtattaacctacaccaatccaagttataccggtttaaaccaccagcgc
agtgtgctattcatcaaccaaaaatatttcctgattatcgatcaggccattggcaaagca
acaggtactttaggcacacattttcaattaaaagaagatagtaaacctgtgtttgataaa
gcaaaaaacagcgtatacaccacttatgctgatggcaataaccttttaattcaaaattta
aattcagatcaggtttcgctcagcgaagaagaaggaaaagtttcttatgtatacatgaaa
gaaatcagcaggcctgcctttgttttcgaaaaagcgaaaagtgatgccaaaacccaaaac
tttgtgagtatcctttatccatttgatggcgataaagcgcctgtaattacggtaaaagaa
aatgaggggaacgattttgaaaaaggaaacctaaaccttaccctaagcattgatggtaaa
aaaagcgaagtaaaagtagcgctgatgaagtaa
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