Sphingobacteriaceae bacterium GW460-11-11-14-LB5: CA265_12440
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Entry
CA265_12440 CDS
T05546
Name
(GenBank) hypothetical protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
sbx
Sphingobacteriaceae bacterium GW460-11-11-14-LB5
Pathway
sbx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sbx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CA265_12440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbx03021
]
CA265_12440
Transcription machinery [BR:
sbx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CA265_12440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
HTH_20
HTH_40
UPF0122
HTH_24
HTH_5
LacI
GerE
HTH_7
Mga
HTH_11
HTH_10
HTH_38
Motif
Other DBs
NCBI-ProteinID:
ARS40422
UniProt:
A0A1X9Z5U3
LinkDB
All DBs
Position
complement(3105119..3105715)
Genome browser
AA seq
198 aa
AA seq
DB search
MMKTNEKFSDADLIAQLRLGDENAFTEIYRRYWEVLLNTAYQRLRSKEDAEEVVQEIFVN
LYFRRNEIDPKSTLEAYLKTALKFKVIDTYRLQQLHYKHIDNLIAETNLSPVLPDHQLES
KEFKTLILSACSKLPEKCREVFMMFRFEELSHQEIARRAEISVSTVKKHLHKAMLFLREE
FKGSRTYLMIACLLFLSK
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaactaatgagaaattttctgacgctgatttaattgcccaactgaggttaggt
gatgaaaacgcatttactgaaatttatcgcagatattgggaagttctgctcaacacagca
taccagcgcttacgttcgaaagaagatgcggaagaggtggtgcaggaaatatttgttaat
ctctattttcgccgcaatgaaatagatccaaaatctacgctggaggcttatcttaaaaca
gcgcttaagtttaaagtaatcgatacctatcgtttgcaacagctacactataaacatatc
gacaacctgattgcagaaacaaacctttcaccggtattgcctgatcatcagttggaaagc
aaggagtttaaaacacttatactttctgcctgcagtaaattacccgaaaaatgcagggaa
gtatttatgatgtttagatttgaagaactgtcgcatcaggagattgcccggcgtgcggag
atttcggtaagcacggtaaaaaaacatcttcataaagccatgcttttccttagagaggag
tttaaaggcagcagaacctatctgatgattgcctgtttgctttttttatctaaataa
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