Sphingobacteriaceae bacterium GW460-11-11-14-LB5: CA265_19165
Help
Entry
CA265_19165 CDS
T05546
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sbx
Sphingobacteriaceae bacterium GW460-11-11-14-LB5
Pathway
sbx00260
Glycine, serine and threonine metabolism
sbx00460
Cyanoamino acid metabolism
sbx00630
Glyoxylate and dicarboxylate metabolism
sbx00670
One carbon pool by folate
sbx00680
Methane metabolism
sbx01100
Metabolic pathways
sbx01110
Biosynthesis of secondary metabolites
sbx01120
Microbial metabolism in diverse environments
sbx01200
Carbon metabolism
sbx01230
Biosynthesis of amino acids
sbx01240
Biosynthesis of cofactors
sbx04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sbx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CA265_19165 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CA265_19165 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CA265_19165 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CA265_19165 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CA265_19165 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CA265_19165 (glyA)
Enzymes [BR:
sbx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CA265_19165 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
DIMCO_N
Beta-prop_THOC3
Motif
Other DBs
NCBI-ProteinID:
ARS41655
LinkDB
All DBs
Position
complement(4763093..4764364)
Genome browser
AA seq
423 aa
AA seq
DB search
MTRDNQIFELIDKELNRQEHGLELIASENFVSKQVMEAAGSVLTNKYAEGLPGKRYYGGC
QVVDVVEQIAIDRAKELFGAAWVNVQPHSGAQANAAVMLAILQPGDKILGFDLSHGGHLT
HGSPVNFSGKLYQPLFYGVEKETGLIDYKKLEEVALAEKPKLIICGASAYSREWDYAFIR
SVADKIGALVLADISHPAGLIAKGLLANPLPHCHIVTTTTHKTLRGPRGGMIMMGQDFEN
PWGLKTPKGEIRLMSNLLDMAVFPGTQGGPLEHIIAAKAIAFGEALSEEYGTYIKQVAAN
AQAMAKAFVAKGYGIISGGTDNHLMLIDLRNKNITGKVAENALEKAEITVNKNMVPFDDK
SPFVTSGIRVGTAAITTRGLKETEMEKIVDLIDQVLTNPEDEANLNSVKAEVIKLVSAFP
LYK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcgacaaccaaatttttgaacttattgataaggagttaaaccgccaagaacat
ggtttagagcttattgcatcagaaaactttgtaagtaagcaggtaatggaagctgccgga
tcggtactaaccaataaatatgctgaaggcttaccaggaaaacgttactatggcggttgc
caggtagtggatgtagtagagcaaattgctatcgatagggcaaaagagttgttcggtgca
gcatgggtaaatgttcagccacactctggtgcacaagctaacgcagcagtaatgcttgcc
attttgcagccaggtgataaaatattaggatttgatctttctcatggaggtcacttaact
catggttcgcccgttaacttttcgggtaaattataccagcctttattttatggtgttgaa
aaggaaaccggattaattgactataaaaaattagaagaagttgctttagccgaaaaacct
aaattaatcatctgtggcgcatctgcttattctcgcgagtgggattatgcttttatccgt
tcggtagctgataaaattggcgctttggttttagctgatatttctcacccggcaggttta
atcgcaaaaggattgttggccaacccacttccacattgccatattgtaaccactacaact
cacaaaacgttacgtggtccacgtggtggtatgattatgatgggacaggatttcgagaac
ccatggggattaaaaacacctaaaggcgaaatccgtttaatgagcaacttgcttgatatg
gccgttttccctggtacacaaggtggtccgttagagcatattattgcggctaaagcaatt
gcttttggcgaagctttaagcgaggagtacggaacatacattaaacaagtagctgctaac
gcacaggcaatggccaaggcatttgtagcgaaaggatatggtattatttctggtggtaca
gataaccacttaatgctgatcgatcttcggaataaaaatatcactggtaaagtagcagaa
aatgctttagagaaagctgaaattacagtgaacaagaatatggttcctttcgatgataaa
tctccatttgtaacttcaggtatccgtgtaggtactgcggcaatcacaacccgtggttta
aaagaaactgaaatggaaaagattgtcgatttaatcgatcaggttctaaccaacccggag
gatgaagctaacctgaatagtgtaaaagctgaagtgattaaactggtaagcgctttccca
ctttataaataa
DBGET
integrated database retrieval system
