Sphingobacteriaceae bacterium GW460-11-11-14-LB5: CA265_19430
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Entry
CA265_19430 CDS
T05546
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
sbx
Sphingobacteriaceae bacterium GW460-11-11-14-LB5
Pathway
sbx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CA265_19430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbx03400
]
CA265_19430
DNA repair and recombination proteins [BR:
sbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CA265_19430
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CA265_19430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ARS41703
UniProt:
A0A1X9Z9P5
LinkDB
All DBs
Position
complement(4820786..4822828)
Genome browser
AA seq
680 aa
AA seq
DB search
MKFKITSEYQPTGDQPNAIKQLVDGVNANEHYQTLLGVTGSGKTFTVANVIEQTQKPTLI
LSHNKTLAAQLYGEFKNFFPENSVNYFVSYYDYYQPEAFIASSNTYIEKDLSINEEIEKL
RLRTTSSLMSGRRDIIVVSSISCIYGMGNPEDFSRMVFRFGVGLRISRNAFLHSLVEILY
SRTTTDFKRGTFRVKGDTVDIFPAYLDHAYRISFFGDDIEELSSIDPVSGKTIEKLEDMA
IYPANLFVTPKDRFNSSIWGIQEELEIRKNQLIADRHLLEAKRLEERTNFDIEMMKELGY
CSGIENYSRFFDGRQPGMRPFCLLDYFPEDYLMVIDESHVTVPQIRAMYGGDRSRKLSLV
EYGFRLPAALDNRPLNFNEFEALAPQTIYVSATPAEYELEKSEGVVVEQVIRPTGLLDPV
IEIRPAINQVDDLLDEIDITIKDGGRILVTTLTKRMAEELTKYLDRLNIKTRYIHSEIKT
LERVEILRGLRLGEFDVLVGINLLREGLDLPEVTLVAILDADKEGFLRSEKSLIQTIGRA
ARNDKGRVIMYADGITDSMEKTISETNRRRDIQIAYNLENGITPKTVGKSREAILEQTSV
LDFSQKASDNKARAYVENAEISIAADPIVQYMGKAELQRAIDTTRKDMQKAAKDMDFLQA
AKLRDEMFALEKMFNEKFGK
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaaaatcacctcagaatatcaacctaccggagatcagcccaacgctataaaa
caattggtagatggcgtaaatgccaacgaacattatcaaactttattaggggttaccgga
tcgggaaaaacatttacggtagccaatgtaattgagcagacgcaaaaacctaccctgatt
ttgagtcataataaaactttggcggcccagctttatggtgagttcaaaaatttcttccct
gaaaactcggttaattattttgtttcatattacgattattatcagcctgaagcttttatt
gcatcgagcaatacttatatcgagaaagacctgagcataaacgaggagattgaaaaactc
cgtttacgtactacatcgtcattaatgagtggcagacgggatatcatcgtggtatcctct
atctcctgcatttatggtatgggtaatcccgaagatttttcgcgcatggttttccgtttt
ggcgtgggtttacggatttcgaggaatgcatttttgcatagcttggtggagattttatat
tccagaaccacaacagactttaaacgcggaacctttagggttaaaggcgataccgttgat
atttttccagcctatcttgaccatgcttaccgcatttcttttttcggtgatgacattgaa
gaactgtcttcaattgatcccgtttccggaaaaactatcgagaaattagaagatatggct
atttatcctgccaatcttttcgttacaccgaaagataggttcaattcttcgatctgggga
atacaggaagagctggaaatccgcaaaaaccagttaattgcagaccgacatttgctggaa
gcaaaacgtttggaagaacgtaccaacttcgatatcgaaatgatgaaggaattgggttat
tgttctggaattgaaaactactcacgtttctttgatggaaggcaacctggcatgcgtcct
ttctgtttgttggattatttcccggaagattatttaatggtgatcgatgaaagtcacgtt
accgttccgcagatcagggccatgtatggtggagatagatcgaggaaattatctttggtg
gagtatggtttccgtttgccggcggcacttgataacagacctttaaactttaacgagttt
gaagcccttgcgccgcaaaccatttatgtaagtgcaactccggccgaatatgaattggaa
aaatcagaaggtgtggtagtagagcaggtaatcagacccacaggtttgttagatcctgtt
attgagatcagacctgctattaatcaggttgacgatcttttagatgaaatagacattacc
ataaaagatggcggacgtattttggttaccacattaaccaaacgtatggctgaagaactg
acaaaatacctcgatcgcttaaatatcaaaaccaggtacatccattctgaaattaaaacc
cttgaacgtgtagaaattcttcgtggtttacgtttaggagaattcgatgttttagtggga
attaacttactgcgtgaaggattagatttacccgaagttaccttagtggctattttagat
gccgataaggaaggtttcttgcgttcggagaaatcgctcatccaaaccattggccgtgcg
gcccggaacgataaaggccgtgtaattatgtatgctgatggcattacagatagtatggag
aaaacaatatcagaaacgaacaggcgtagagatatacagattgcctacaatctcgaaaat
ggtattaccccaaaaacagttggaaaatcaagagaagccattttagagcaaacctcggtg
ctcgatttctcgcaaaaggcaagtgataataaagcaagggcctatgtcgaaaatgcagaa
atcagtattgctgcagatccgattgttcaatatatgggtaaagcggaactgcaaagggca
attgatactacccgtaaggacatgcagaaagcagcaaaagatatggactttttgcaggcc
gcaaaattgcgtgatgaaatgtttgccctggagaaaatgttcaacgaaaaattcggtaag
taa
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