Sphingobacteriaceae bacterium GW460-11-11-14-LB5: CA265_20205
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Entry
CA265_20205 CDS
T05546
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
sbx
Sphingobacteriaceae bacterium GW460-11-11-14-LB5
Brite
KEGG Orthology (KO) [BR:
sbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbx03400
]
CA265_20205
DNA repair and recombination proteins [BR:
sbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
CA265_20205
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
ARS41850
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All DBs
Position
4992846..4993349
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AA seq
167 aa
AA seq
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MATKKYPEDKDVIKVPRFEEAAGFYTTIERSKRMANIKSKNTKAEVLLRKALWAKGLRFR
IHVKNMPGKPDIVINKYRLAIFVDGSFWHGYKWEQKKAEIKSNMDFWIPKIESNMLRDVK
NSKDLEDAGYTVMRFWDHQIKKELKKCINQICLYVETAKTSSIPSLM
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaaaaaatatccggaagataaagatgtcattaaagtacctcgctttgaagag
gccgcaggtttctatactaccatagagcgtagtaaaagaatggccaatattaaaagcaaa
aatactaaagcagaagtgttattaagaaaagcactatgggcaaaagggctacgttttcga
atacacgtaaaaaatatgcctggcaaaccggatattgtgatcaataaatatcgtttggcc
atatttgttgatgggagtttctggcatgggtacaaatgggaacagaaaaaagcagaaatc
aaaagtaatatggatttttggattccaaagatcgaaagcaatatgctaagagatgttaaa
aatagtaaggatctggaagatgctggttatactgttatgaggttttgggatcaccagatt
aaaaaagaactcaaaaagtgtattaatcaaatttgtttatatgtagaaactgctaaaaca
agctcaattccttcacttatgtaa
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