Sphingobacteriaceae bacterium GW460-11-11-14-LB5: CA265_21810
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Entry
CA265_21810 CDS
T05546
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sbx
Sphingobacteriaceae bacterium GW460-11-11-14-LB5
Pathway
sbx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CA265_21810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbx03019
]
CA265_21810
03110 Chaperones and folding catalysts [BR:
sbx03110
]
CA265_21810
03029 Mitochondrial biogenesis [BR:
sbx03029
]
CA265_21810
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbx04147
]
CA265_21810
Enzymes [BR:
sbx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CA265_21810
Messenger RNA biogenesis [BR:
sbx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CA265_21810
Chaperones and folding catalysts [BR:
sbx03110
]
Heat shock proteins
HSP60 / Chaperonin
CA265_21810
Mitochondrial biogenesis [BR:
sbx03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CA265_21810
Exosome [BR:
sbx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CA265_21810
Exosomal proteins of other body fluids (saliva and urine)
CA265_21810
Exosomal proteins of breast cancer cells
CA265_21810
Exosomal proteins of colorectal cancer cells
CA265_21810
Exosomal proteins of bladder cancer cells
CA265_21810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
Motif
Other DBs
NCBI-ProteinID:
ARS42149
LinkDB
All DBs
Position
complement(5362714..5364348)
Genome browser
AA seq
544 aa
AA seq
DB search
MSKQVKYNVEARDALKRGVDILANAVKVTLGPKGRNVIIDKKFGSPAITKDGVTVAKEIE
LKDAVENMGAQMVKEVASKTADIAGDGTTTATVLAQAIITTGIKNVAAGANPMDLKRGID
KAVAAVVENLKSQSQAVGDDNNKIKQVASISANNDEVIGSLIAEAMSKVGKDGVITVEEA
KGTETEVKTVEGMQFDRGYLSPYFVTNADKMEAELENPYILIYDKKISNMKELLPVLEKT
VQTGKPLVIISEDLDGEALATLVVNKIRGSLKVVAVKAPGFGDRRKAMLEDIAILTGGIV
VSEERGYKLENADLTYLGSAEKVVVDKDNTTVINGAGNSDDIKSRVSQIKSQIETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVAFI
RAVEALANLKGANEDENTGIQIIRRAIEEPLRQICENAGIEGSIVVQKVKEGKADFGYNA
RTDVYENLIGAGVIDPTKVSRVALENAASIAAMLLTTEVVLADEPEEGGAPMPPMGGGGM
GGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacaagtaaaatataacgtagaagcacgcgacgccctgaaaagaggtgttgat
attcttgcaaatgcagtaaaagtaaccttaggtccaaaaggccgtaatgtaattatcgat
aaaaaattcggttcaccggcaatcacaaaagatggtgttacggttgcaaaagaaatcgaa
ttgaaagatgcagtagagaacatgggtgctcaaatggttaaagaagtagcttcaaaaaca
gctgatattgctggtgatggtacaactacggctactgtattggcgcaggcgattattact
acaggtattaaaaacgttgctgctggtgcaaacccaatggatttaaaacgtggtattgat
aaagcggttgctgctgttgtagaaaacttaaaatctcaatcgcaagcggttggtgatgat
aacaataaaattaaacaagtagcgtctatttcggctaataacgacgaggtgatcggttcg
ttaattgctgaggccatgagcaaagttggtaaagatggtgtaattacggttgaagaagca
aaaggtaccgaaactgaagttaaaacagtagaaggtatgcaatttgacagaggttattta
tctccatattttgtaaccaatgcagataaaatggaagctgaattagaaaatccttacatt
ttaatctacgacaaaaaaatcagtaacatgaaagaattgttaccggttctagaaaaaact
gttcaaacaggcaaaccattggtaatcatttctgaggatttagatggcgaagctttagca
acattggtagtaaacaaaatccgcggttcgttaaaagttgttgcggttaaagcaccaggt
tttggcgacagaagaaaagccatgttggaagacatcgcgatcttaactggtggtattgta
gtatcagaagaaagaggttacaaattagaaaatgctgatttaacttacttaggttctgct
gagaaagttgttgttgataaagacaatacaactgtaattaacggtgctggtaactcagat
gatattaaatctcgtgttagccaaattaaatctcagatcgaaacaactacatctgattac
gataaagaaaaattacaagagcgtttagctaaattagctggcggtgttgcggttctttac
gtaggtgcagctagtgaggttgaaatgaaagagaaaaaagaccgtgttgatgatgcttta
catgcaacccgtgcggctgtagaagaaggtattgttgctggtggtggtgttgcttttatc
cgtgcggttgaagccttagctaacctaaaaggtgctaacgaagatgaaaatacaggtatc
cagatcatccgtcgcgctatcgaagagccattacgtcaaatttgcgaaaacgcaggtatt
gaaggttctatcgtagttcaaaaagttaaagaaggtaaagccgatttcggttacaatgca
cgtactgatgtttacgaaaacttaattggtgccggtgttatcgacccaactaaagtaagt
cgtgtagcattagaaaatgcagcttctattgcagcgatgttattaactacagaagttgtt
ttagcagacgaacctgaagaaggtggtgctccaatgcctccaatgggcggcggcggtatg
ggtggtatgatgtaa
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