Sphingobacteriaceae bacterium GW460-11-11-14-LB5: CA265_24035
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Entry
CA265_24035 CDS
T05546
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
sbx
Sphingobacteriaceae bacterium GW460-11-11-14-LB5
Pathway
sbx00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbx00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CA265_24035
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sbx01007
]
CA265_24035
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbx03016
]
CA265_24035
Enzymes [BR:
sbx01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
CA265_24035
Amino acid related enzymes [BR:
sbx01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CA265_24035
Transfer RNA biogenesis [BR:
sbx03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CA265_24035
Prokaryotic type
CA265_24035
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF8567
CLIP1
DUF4175
Vps53_N
TipAS
FapA
TMF_DNA_bd
Motif
Other DBs
NCBI-ProteinID:
ARS42564
LinkDB
All DBs
Position
5856608..5857879
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AA seq
423 aa
AA seq
DB search
MLQVNYIRENREKVLERLSIRNFKQPELVDEIIKIDEDRRSTQTSLDNISAEANAAAKQI
GDLMRTGKKEEAEAIKAQTASHKENIKNLSDKLNELETAQHNLIVQLPNLPYHLVKQGST
ADDNEIVLTHGEPAQLPSKALPHWELAAKYDIIDFELGVKITGAGFPVYKGKGARLQRAL
INFFLDHATAAGYKEMQVPHLVNAASGFGTGQLPDKEGQMYHSTVDDLYLIPTAEVPVTN
LYRDVIVKEEDLPIKNTAYTPCFRREAGSYGAHVRGLNRLHQFDKVEVVQITHPDQSYET
LEDMSLYVQSLLQELGLHYRVLRLCGGDMGFTSAMTYDMEVWSAAQERWLEVSSVSNFET
YQSNRLKLRFKGKEGKAQLAHSLNGSALALPRIVASILENYQTENGIKIPEALVKYTGFD
IID
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaagttaactatatccgcgaaaatagagagaaagttttagaacgtttaagtatc
cgtaattttaaacagccagaactggtagacgaaatcatcaaaatagatgaagaccgccgt
tctacacaaacttccctggataatatttccgctgaggctaatgcagctgccaaacagatt
ggcgatttaatgcgtacgggtaaaaaagaagaagctgaagcgattaaggcgcaaactgct
tctcataaagaaaatatcaaaaacctgagcgataaactaaacgagctggaaacggctcag
cataatttaattgtgcagttgccgaatttaccatatcatttagtcaaacagggatcaact
gcagatgataacgagattgttttaacacatggtgagcctgcccagttaccaagcaaagct
ttaccgcattgggagcttgcggcgaaatatgatattatcgatttcgaactgggtgtaaaa
attactggtgctggttttccggtatataaaggaaaaggcgccaggttacaacgggcactc
atcaatttcttcttagatcatgctactgcagctggttataaagaaatgcaggtacctcac
ctggttaatgcagcttcaggttttggtaccgggcagttacccgataaggaagggcagatg
tatcattcaacagttgatgatttatatttaattccaactgccgaagtaccggtaaccaat
ttataccgtgatgtaattgttaaggaagaagatcttccgattaaaaatacggcctataca
ccttgtttccgtagagaagcgggttcttatggtgcgcatgtacgtggtttaaaccgttta
caccagtttgataaggtagaagtcgtgcagattacacatcctgatcaatcttacgaaact
ttagaagatatgagcctatatgttcagtctcttttacaggaactgggcttacattaccgt
gtgctgcgtttgtgcggtggcgatatgggctttacttcggccatgacttacgatatggag
gtttggagtgctgctcaagagcgctggttagaagtttcttctgtatcaaatttcgaaact
tatcagagtaaccgtttgaaattgcgttttaaaggaaaagaaggtaaggcgcaactggct
cactccttaaatggaagtgcattggcgctaccgcgtattgtggcttcaattttagaaaac
taccaaacggagaacggtattaaaattccggaagctttagtaaagtacaccggatttgat
attattgattaa
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