Sphingobacteriaceae bacterium GW460-11-11-14-LB5: CA265_25080
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Entry
CA265_25080 CDS
T05546
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
sbx
Sphingobacteriaceae bacterium GW460-11-11-14-LB5
Pathway
sbx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CA265_25080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbx03400
]
CA265_25080
DNA repair and recombination proteins [BR:
sbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CA265_25080
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CA265_25080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
AAA_16
DnaJ_CXXCXGXG
RsgA_GTPase
nSTAND3
Viral_helicase1
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ARS42758
UniProt:
A0A1X9ZBW2
LinkDB
All DBs
Position
6105181..6108093
Genome browser
AA seq
970 aa
AA seq
DB search
MSNKSVDLGEQKDVEVYGARVHNLKNIDVSFPRNQLVVITGLSGSGKSSLAFDTIYAEGQ
RRYMETFSAYSRQFMGGMERPDVDKVSGLSPVIAIEQKTTSKNPRSTVGTITEIYDFMRL
LYARVADAYSYNTGEKMERMSEDQILQNIFNKFDGVAVNILAPVVKGRKGHYRELFEQIR
KQGYVKVRIDGEIKDITAKMQVDRYKIHDIEVVIDRLIIDVKDKKRLLDSLQIAMKMGKG
VIKISDKDNNVAHFSKFLMCPTTGISYDEPQPNSFSFNSPYGACERCDGLGYIFVVDKES
VIPNPKLSILNGGLAPLGEYRDIWMFQVLKALAKKYNFSLSTPIEKLGDEVINIILNGTH
DLINVAVEYNKWNVQNYNITFDGIIKMLEEQNEKRGEAAVDDMETFRKLKTCPECNGARL
KKESLHFKVDGKNIFELSSMDIFNLHSWFEKVDERLTDRQNIIAKEILKEIKARIGFLTD
VGLTYLTLDRTARTLSGGEAQRIRLATQIGSQLMNVMYILDEPSIGLHQRDNERLINALK
NLRDLGNTVLVVEHDKDMILEADWVIDVGPGAGIHGGTVVAEGTAAHILKSKTLTADYLN
GRKKIETPKTRRKGNGHKLSIVKATGHNLKEVSVDFPLGKFIAVTGVSGSGKSSLITETL
YPILNHHFFRAKKQPLPYEKINGLKEIDKVIEIDQAPIGRTPRSNPSTYTGVFSDIRNLF
VQLPEAKIRGYKPGRFSFNVKGGRCETCQGAGLKVIEMNFLPDVQVPCEECGGKRYNRET
LEVRFRGKSISDVLDMSIEDACNFFENIPIIYRKIKTLKDVGLGYITLGQSSVTLSGGEA
QRVKLATELSKKDTGKTFYILDEPTTGLHFEDINVLLGVLQELVDKGNTILVIEHNLDVV
KVADWVIDLGEEGGAGGGRILFEGTPEGLIQNPISLTGKFLKKEMDWEKGFEESGVSSPK
SEVKASRKKK
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataaatctgtcgacctcggtgagcaaaaagatgtagaagtatatggcgcgagg
gtacataatttaaagaatatagatgtcagttttccgcgcaaccaacttgttgttataaca
gggttaagtggtagcggtaaatcttcattggcttttgataccatttatgcagaaggacag
cgccgttatatggaaacatttagcgcttacagccgtcagtttatgggcgggatggagcgt
cctgatgtagataaggtttcgggactgagtccggttattgccattgagcaaaaaaccact
agcaaaaatccgcgctctaccgtaggtaccatcaccgagatttacgattttatgcgcttg
ctttatgcacgtgttgccgatgcctattcgtacaataccggcgaaaagatggagcgcatg
agcgaagatcagattctgcagaatatctttaataaatttgatggggtagctgtgaatatc
cttgcacctgttgtaaaaggcagaaaggggcattaccgcgaactttttgagcagattcgt
aagcaaggttatgtaaaggttcgcatagatggtgaaataaaagatattaccgctaaaatg
caggtagatcgttataaaatccacgatatcgaagtggtgattgaccgcctgattattgat
gttaaggataaaaaacgcttgctcgattcattgcagattgcgatgaagatgggtaaaggc
gtaatcaaaattagcgacaaggataataacgttgcgcatttcagtaagtttttaatgtgc
ccaactacgggtatttcttacgatgagcctcagccgaacagtttttcattcaactcgcca
tatggggcctgcgagcgttgcgatggtttaggttatatcttcgtggtggataaagaatcg
gtgattccgaaccccaaactgagtattttaaatggtggtttagcgccactgggcgaatat
agagacatctggatgttccaggtgttaaaggccctggctaaaaaatataatttctcgctt
tctaccccgatcgaaaaactgggcgatgaagtgatcaatattatcttaaatggtacacat
gacctgattaatgtggctgttgagtataataaatggaacgttcagaattataatatcact
tttgatggtattattaagatgctcgaagagcagaacgaaaaaaggggcgaggctgcggtt
gacgatatggagactttccgtaaactgaaaacctgtccggagtgtaatggcgccaggctg
aaaaaagaaagtctgcatttcaaggtggatggtaagaatattttcgaactgtcatcaatg
gacatttttaacctgcatagctggtttgaaaaagtagacgaacgccttaccgatcgccag
aatattattgcaaaggaaattttaaaggaaattaaagccaggatcgggtttttaactgat
gtgggtttaacttatttaactttagatcgtacagcgcgtacactttctggtggcgaggcg
caacgaatccgtttggctacacagatcggctcgcagttgatgaacgtcatgtacatcctc
gacgagccaagtatcggtttgcaccagcgtgataacgaacgtttgattaatgcacttaaa
aatcttcgtgatcttggaaacaccgttttggtggtagagcacgataaggatatgattttg
gaagccgattgggtaattgatgtcggcccgggagcaggtattcatggcggaacagtagtg
gcagaagggactgcagcacatattttaaaatcgaaaaccttaactgccgattacctcaac
ggcagaaagaaaattgaaacaccaaaaacccgtagaaaaggcaatggacataaactttcg
attgttaaagcaaccggtcataacttaaaagaggtttcggtagattttcctttgggtaaa
tttattgccgtaacaggtgtttcgggtagtggtaaatccagtttgattaccgaaactttg
tatcctattttaaatcatcatttcttcagggcgaaaaaacaacctttgccttacgagaaa
attaatgggttaaaagaaattgataaggtaattgaaattgatcaggcacctatcggcaga
acgccacgctcaaatccttctacttatacgggagtgttttctgacatcagaaatctgttc
gtgcagttgcctgaggcaaaaatccgtggttacaagccgggtcgtttctcttttaacgta
aagggtggtcgctgcgaaacctgtcagggtgcaggtttaaaggtaatcgaaatgaatttc
ttacctgatgtgcaggtgccttgcgaagaatgtggagggaaaagatataacagggaaact
ttagaagttcgtttccgcggaaaatcgattagtgatgtgctggacatgagtatcgaagat
gcctgtaatttcttcgaaaatatccccatcatctacaggaagattaaaacattgaaagat
gttggtttaggttacattactttggggcaatcgtcggttaccttatcaggaggagaggca
cagcgtgttaaactggctaccgaactttctaaaaaagataccggaaaaaccttctacata
ttagatgaacctacaaccggacttcacttcgaagatattaatgtgcttttgggcgtgtta
caagaactggttgataaaggaaataccattttggtaatcgaacataacttagatgtggtg
aaagtagccgattgggtaatcgatttaggtgaagaaggtggtgctggtggcggaaggatt
ttattcgaaggtacaccggagggtttaatccagaatccgatcagcttaaccggaaagttt
ttgaaaaaggaaatggattgggagaaggggtttgaagagtccggagtcagtagtccgaag
tccgaagtcaaagcgtccaggaagaagaaataa
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