KEGG   Streptomyces buecherae: H7H31_01150
Entry
H7H31_01150       CDS       T07050                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
sby  Streptomyces buecherae
Pathway
sby03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sby00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    H7H31_01150
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sby03400]
    H7H31_01150
Enzymes [BR:sby01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     H7H31_01150
DNA repair and recombination proteins [BR:sby03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     H7H31_01150
SSDB
Motif
Pfam: LigD_Prim-Pol
Other DBs
NCBI-ProteinID: QNJ38674
LinkDB
Position
341832..342743
AA seq 303 aa
MSAAPDRQAVRVDGHQLALTHLRKTLFPESEHTKAELLHYYARIAPLMVPHTTDRAASFV
RAPDGVDGERWYAKNPPPGCPEWVTLTSVPGKGEPAPHVVVDSTATLVAMANLGAYEVHV
PQWRAGAGPAVHDRVVFDLDPGPGADVTDCCRVALPLRAALAADGLTACAVTSGSKGLHL
YVAVEPAPAETAVAYAKRLAVRMRAELPDLAVATMSRAARHGKVFIDWSQNASAKTTAAP
YTLRIRERPGVATPVDWDEVAACAHPADLAFGPEEALARVEERGDDPLAPLSDAARRGRL
PET
NT seq 912 nt   +upstreamnt  +downstreamnt
atgtccgcagcccccgaccgacaggccgtgcgggtggacggccaccaactggccctgacc
cacctgcgcaagacgctcttccccgagtcggagcacaccaaggccgagctcctgcactac
tacgcgcgcatcgccccgctgatggtgccgcacaccaccgaccgggcggcctcgttcgtc
cgcgccccggacggcgtggacggcgagcgctggtacgccaagaacccgccccccggctgc
cccgagtgggtcaccctcacctccgtgcccggcaagggggaaccggccccgcacgtcgtc
gtcgactcgaccgcgacgctggtggcgatggccaacctcggggcgtacgaggtgcacgtg
ccgcagtggcgggccggcgccgggccggcggtgcacgaccgggtcgtcttcgacctcgac
ccggggcccggcgccgacgtcaccgactgctgccgggtggcgctcccgctgcgcgccgcg
ctcgccgccgacggtctgacggcctgcgcggtcacctccggctccaagggcctgcacctg
tacgtggcggtggagcccgcccccgccgagaccgcggtggcctacgccaagcggttggcg
gtgcggatgcgggcggagttgcccgacctcgcggtggcgacgatgtcgcgcgccgcgcgg
cacggcaaggtgttcatcgactggtcccagaacgcctcggcgaagaccacggccgccccg
tacacgctgcgtatccgcgagcgtcccggcgtggcgacgccggtcgactgggacgaggtc
gccgcgtgcgcgcacccggccgacctggccttcggcccggaggaggcgctggcgcgcgtc
gaggagcggggcgacgatccgctcgcgccgctgagcgacgcggcgcggcgcgggcggctg
cccgagacgtag

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