Streptomyces buecherae: H7H31_07560
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Entry
H7H31_07560 CDS
T07050
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sby
Streptomyces buecherae
Pathway
sby03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sby00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H7H31_07560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sby03019
]
H7H31_07560
03016 Transfer RNA biogenesis [BR:
sby03016
]
H7H31_07560
Enzymes [BR:
sby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
H7H31_07560
Messenger RNA biogenesis [BR:
sby03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H7H31_07560
Transfer RNA biogenesis [BR:
sby03016
]
Prokaryotic type
tRNA degradation factors
H7H31_07560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
CdsD_C
KH_2
KH_PNO1_2nd
KH_KhpA-B
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
QNJ39752
LinkDB
All DBs
Position
complement(2079567..2081783)
Genome browser
AA seq
738 aa
AA seq
DB search
MENETHYAEAVIDNGSFGTRTIRFETGRLARQAAGSAVAYLDDDTMVLSATTASKNPKDQ
LDFFPLTVDVEERMYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQI
VETIMALNPDHLYDVVAINAASCSTQLAGLPFSGPIGGTRVALINGQWVAFPTHSELENA
VFDMVVAGRVLEDGDVAIMMVEAEATEKTIQLVKDGADAPTEEVVAAGLEAAKPFIKALC
QAQAELAAKAAKPTGEFPVFLDYQDDVLEALTAAVRTELAQALTIAGKQERESELDRVKA
LAAEKLLPQFEGREKEISAAYRSLTKTLVRERVIKEKKRIDGRGVTDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSTGETGRVGSP
KRREIGHGALAERALTPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISQEIDGKTHYVTLTDILGAEDAFGDMDFKVAGTKTFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMNEAIDVPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGADITIEDDGTIYIGAADGPAAEAARATINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLAVGSKVQVEIAEIDQRGKLSL
IPVIEGEDGDDQKDEAAQ
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaggccgtcatcgacaacggcagcttcggcacccgc
accatccgcttcgagacgggccgcctggctcgccaggccgccggctccgccgtggcctac
ctggacgacgacaccatggtgttgtcggccaccacggcctcgaagaacccgaaggaccag
ctcgacttcttcccgctgacggtggacgtcgaggagcggatgtacgcagccggcaagatc
cccggctccttcttccgtcgtgagggccgcccctccgaggacgcgatcctcacctgccgc
ctgatcgaccgcccgctgcgcccctccttcaagaagggcctgcgcaacgagatccagatc
gtcgagacgatcatggcgctcaaccccgaccacctgtacgacgtggtcgccatcaacgcc
gcctcctgctccacgcagctcgcgggcctgcccttctccggccccatcggcggcacccgg
gtcgcgctgatcaacggccagtgggtcgccttcccgacccactcggagctggagaacgcc
gtcttcgacatggtcgtcgccggtcgcgtcctggaggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaagaccatccagctcgtcaaggacggcgccgacgctccc
accgaggaggtcgtggccgccggtctcgaggccgccaagccgttcatcaaggcgctctgc
caggcccaggccgagctggccgccaaggccgcgaagccgaccggcgagttcccggtcttc
ctcgactaccaggacgacgtcctggaggcgctgaccgcggccgtccgcaccgagctggcc
caggcgctgaccatcgccggcaagcaggagcgcgagagcgagctggaccgcgtcaaggcg
ctggccgccgagaagctgctgccgcagttcgagggccgcgagaaggagatctccgccgcg
taccgttcgctgaccaagaccctggtccgcgagcgcgtcatcaaggagaagaagcgcatc
gacggccgtggcgtcacggacatccgtacgctggccgccgaggtcgaggcgatcccgcgg
gtgcacggctcggccctgttcgagcgcggcgagacccagatcctgggcgtcaccacgctg
aacatgctccgcatggagcagcagctcgacacgttgtcgccggtgacgcgcaagcgctac
atgcacaactacaacttcccgccgtactccaccggtgagaccggccgcgtgggctcgccc
aagcgccgcgagatcggccacggcgcgctcgccgagcgcgccctgacgccggtgctgccg
acgcgcgaggagttcccgtacgcgatccgtcaggtctccgaggcgctgggctccaacggc
tcgacctcgatgggctcggtctgcgcgtccacgatgtcgctgctgaacgccggtgtgccg
ctcaaggccccggtcgccggcatcgccatgggcctgatctcgcaggagatcgacggcaag
acgcactacgtcaccctcaccgacatcctcggtgcggaggacgcgttcggtgacatggac
ttcaaggtcgcgggcaccaagaccttcgtcaccgcgctgcagctcgacaccaagctcgac
ggcatccccgcctccgtgctggccgccgcgctcaagcaggcccgggacgcccggctgcac
atcctcgacgtgatgaacgaggccatcgacgttccggacgagatgtccccgaacgcgccg
cggatcatcaccgtcaagatcccggtggacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgacatcacgatcgaggacgacggc
accatctacatcggtgccgccgacggcccggccgccgaggccgcgcgcgccacgatcaac
ggcatcgccaacccgaccatgccggaggtcggcgagcgctacctgggcacggtcgtcaag
accacgaccttcggcgcgttcgtctccctgctcccgggcaaggacggcctgctgcacatc
tcgcagatccgcaagctcgccggtggcaagcgcgtggagaacgtcgaggacgtgctcgcg
gtgggctcgaaggtgcaggtcgagatcgccgagatcgaccagcgcggcaagctctccctg
atccccgtgatcgagggcgaggacggcgacgaccagaaggacgaagccgcccagtga
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