Streptomyces buecherae: H7H31_14015
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Entry
H7H31_14015 CDS
T07050
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
sby
Streptomyces buecherae
Brite
KEGG Orthology (KO) [BR:
sby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sby03016
]
H7H31_14015
Enzymes [BR:
sby01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
H7H31_14015
Transfer RNA biogenesis [BR:
sby03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
H7H31_14015
Prokaryotic type
tRNA splicing ligases
H7H31_14015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
QNJ40828
LinkDB
All DBs
Position
complement(3700764..3701957)
Genome browser
AA seq
397 aa
AA seq
DB search
MTYTEVPGAHVPIRMWADPATVEGVAMQQLRNVATLPWIKGLAVMPDVHYGKGATVGSVI
AMRGAVCPAAVGVDIGCGMSAVKTSLTDRDLPDDLSRLRSKIEQAIPVGRGMHDAPVDPG
KLYGLPTAGWDDFWSRFDGVADAVKFRQDRATKQMGTLGGGNHFVEVCVDGEGAVWLMLH
SGSRNIGKELAEHHIGEAQKLPHNQGLVDRDLAVFVSDTPQMAAYRNDLFWAQEYAKRNR
SIMMALLQEVLRREFRKAKVTFDDVISCHHNYVSEERYDGMDLLVTRKGAIRAGAGEYGI
IPGSMGTGSYIVRGLGNAASFNSASHGAGRKMSRNAAKKRFSTQDLEEQTRGVECRKDSG
VVDEIPGAYKPIEKVIDQQRDLVEVVAKLKQVVCVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
gtgacctacacagaggtaccgggcgcccacgtgccgatccgcatgtgggctgacccggcc
accgtggagggcgtcgcgatgcagcaacttcgcaacgtcgcgacgctcccgtggatcaag
ggcctggccgtcatgcccgacgtgcactacggcaagggggccacggtcggctccgtcatc
gccatgcggggcgcggtgtgcccggcggcggtcggggtggacatcggctgcggcatgagc
gcggtcaagacgtcgctgaccgaccgcgacctgccggacgacctgtcgcggctgcgctcc
aagatcgagcaggccatcccggtgggccgcggcatgcacgacgcgccggtggaccccggg
aagctgtacgggctgccgacggcgggctgggacgacttctggtcccggttcgacggcgtg
gccgacgcggtgaagttccgtcaggaccgggcgaccaagcagatggggacgctcggcggc
ggcaaccacttcgtggaggtctgcgtggacggcgagggcgcggtgtggctgatgctgcac
tcgggctcccgcaacatcggcaaggaactcgccgagcaccacatcggcgaggcccagaag
ctgccgcacaaccagggtctggtcgaccgtgacctggccgtcttcgtctcggacaccccg
cagatggcggcgtaccgcaacgacctgttctgggcgcaggagtacgccaagcgcaaccgg
tcgatcatgatggcgctcctccaggaggtgctgcggcgcgagttccgcaaggcgaaggtc
accttcgacgacgtcatctcctgccaccacaactacgtcagcgaggagcgctacgacggg
atggacctgctggtcacccgcaagggcgcgatccgggccggcgcgggtgagtacggcatc
atcccgggctcgatgggcaccggctcgtacatcgtgcggggcctcggcaacgccgcgtcc
ttcaactccgcctcgcacggcgcgggccgcaagatgagccgcaacgccgcgaagaagcgc
ttctcgacgcaggacctggaggagcagacgcgcggcgtggagtgccggaaggactccggc
gtcgtggacgagatcccgggcgcgtacaagccgatcgagaaggtcatcgaccagcagcgg
gacctggtcgaggtggtggccaagctgaagcaggtcgtctgcgtgaaggggtga
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