KEGG   Streptomyces buecherae: H7H31_29350
Entry
H7H31_29350       CDS       T07050                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
sby  Streptomyces buecherae
Pathway
sby03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sby00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    H7H31_29350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sby03019]
    H7H31_29350
Messenger RNA biogenesis [BR:sby03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     H7H31_29350
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 Mur_ligase_C
Other DBs
NCBI-ProteinID: QNJ43338
LinkDB
Position
complement(7341589..7343274)
AA seq 561 aa
MSHPHPELKAAPPLPKGGLRIVALGGLGEIGRNMTVFEHAGKLLIVDCGVLFPEENQPGV
DVILPDFTSIRDRLDDIVAVVLTHGHEDHIGGVPYLLRERADIPVVGSKLTLAFLEAKLK
EHGIRPRTVRVREGDRRGFGPFDCEFVAVNHSIPDGLAVAIRTGAGMVLHTGDFKMDQFP
LDDRITDLRAFARLGEEGVDLFLTDSTNAEVPGFTTSERDLNPAIEQVLRTAPRRVIVSS
FASHVHRIQQVLDAAHQHGRKVAFVGRSMVRNMGIARELGYLQVPPGLVVSTKELESLPD
HQITLVCTGSQGEPMAALSRMANRDHMIRIGEGDTVLLASSLIPGNETAIYRVINGLTRW
GAHVVHKGNAKVHVSGHASAGELVYCYNIVKPRHVMPVHGEWKHLRANADLAIRTGVAPD
RVVIAEDGVVVDLVNGRASITGKVPAGNVYVDGMTVGGATEASLKDRVTLAAEGVVTVVA
IVDADTGALTEPPDFLARGFVHDDATFEPVIPVIEKTLAKAAEEGVGDAHQLEQLVARAV
ANWAFRTYRRKPLIIPVIIDA
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgagccatccgcatcccgaactcaaagccgctccaccgctgcccaaaggggggctgagg
atcgtcgctctgggcggtctcggtgagatcggccgcaacatgaccgtcttcgagcacgcc
ggcaagctcctgatcgtcgactgtggcgtgctgttccccgaagagaaccagcccggggtg
gacgtgatcctccccgacttcacctcgatccgggaccgcctggacgacatcgtggccgtg
gtgctgacccacggccacgaggaccacatcggcggcgtgccgtacctgctgcgggagcgg
gcggacatccccgtggtcggctccaagctgacgctcgcgttcctggaggccaagctcaag
gagcacggcatccggccccgtacggtacgggtgcgcgagggtgaccggcgcggcttcggc
cccttcgactgcgagttcgtcgcggtcaaccactccatcccggacggcctggcggtggcg
atccgcaccggcgccggcatggtgctgcacaccggcgacttcaagatggaccagttcccg
ctggacgaccggatcaccgatctgcgcgccttcgcccgactgggtgaggagggcgtcgac
ctcttcctcaccgactccaccaacgccgaggtgcccggcttcacgacctccgaacgcgat
ctgaacccggcgatcgagcaggttctgcgcaccgccccgcggcgggtcatcgtctccagc
ttcgccagccacgtccaccgcatccagcaggtcctggacgccgcccaccagcacggccgc
aaggtcgccttcgtgggccggtccatggtccgcaacatgggcatcgcccgcgaactcggc
tacctccaggtcccgcccggcctggtggtgagcaccaaggagctggagtcccttccggac
caccagatcaccctggtgtgcaccgggtcccagggtgagccgatggccgcgctctcccgc
atggccaaccgcgaccacatgatccgcatcggcgagggggacaccgtcctgctcgccagt
tccctgatccccggcaacgagaccgccatctaccgggtgatcaacgggctgacccggtgg
ggcgcgcacgtcgtccacaagggcaacgccaaggtgcacgtctcgggccacgccagcgcg
ggcgagctggtgtactgctacaacatcgtcaagccgcggcacgtgatgcccgtgcacggc
gagtggaagcacctgcgggccaacgccgacctggccatccgtaccggcgtcgcgcccgac
cgcgtcgtcatcgcggaggacggcgtcgtggtcgacctggtcaacggccgcgcctcgatc
accggcaaggtgcccgccggcaacgtgtacgtggacggcatgacggtcggcggcgccacc
gaggcgtccctcaaggaccgggtcaccctcgcggcggagggcgtggtcaccgtcgtggcg
atcgtcgacgccgacacgggcgccctcaccgagccgcccgacttcctggcccgcggcttc
gtccacgacgacgccaccttcgagccggtcatccccgtgatcgagaagaccctggccaag
gcggccgaggagggcgtcggagacgcgcaccagctcgaacaactcgtcgcccgtgccgtg
gccaactgggccttccgcacctaccgccgcaagccgctgatcatccccgtcatcatcgac
gcctga

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