Salmonella bongori N268-08: A464_196
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Entry
A464_196 CDS
T02733
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
sbz
Salmonella bongori N268-08
Brite
KEGG Orthology (KO) [BR:
sbz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbz03019
]
A464_196
Enzymes [BR:
sbz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
A464_196
Messenger RNA biogenesis [BR:
sbz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A464_196
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
CON_HrpB
DEAD
Helicase_C
AAA_22
HA2_N
Hemerythrin
DUF2732
Motif
Other DBs
NCBI-ProteinID:
AGR57382
UniProt:
S5NAQ1
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All DBs
Position
203657..206131
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AA seq
824 aa
AA seq
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MLQCSAEKVNPVEPFVTSLPVAAVLPELLTALKTAPQVLLSAPTGAGKSTWLPLQLLQQS
PVAGKILLLEPRRLAARNVAQRLAEGLNEKPGETVGYRMRAQSCVGPRTRLEVVTEGVLT
RMIQRDPELSGVGLVILDEFHERSLQADLALALLLDIQQGLRDDLKLLIMSATLDNDRLC
QRLPDAPVILSEGRAFPVERRYQPLAAHLRFEDAVAMATAELLRNESGSLLLFLPGTGEI
QRVQEHLASRVGNDVLLCPLYGALSLEAQRKAILPAPVGMRKVVLATNIAETSLTIEGIR
LVVDSAQERVARFDARTGLTRLITQRISQASMTQRAGRAGRLAPGICLHLLAKEQAERAA
AQSEPEILHSDLSGLLMEILQWGCSDPASLFWLDTPPEVNIQAARRLLVMLGALDGEQLN
ARGRKMATAGNDPRLAAMLVNADEGDSAATAAMLAALLEEPPRGIGTDLSVAFSRRQPGW
QQRSQQLLKRLNIRSGEPDSALIAPLLARAFSDRIARRRGQEGRYQLANGMGARLDADDA
LGRHEWLIAPLLLQGSASPDARILLAQPLDMASLVQACPDLLQQSDTIEWDEALGTLKAW
RRMRIGQLTVNVQPLAKPSEEELHQAMLNGIRDKGLAVLDWTPEAEQFRLRLHCAAKWLP
EYDWPAVDEASLLATLERWLLPHMSGVQSLRGLKSLNVNQALRGLLDYPMLQRLDSELPG
HYTVPTGSRITIRYHEDNPPALAVRMQEMFGEASTPTLAQGRVPLVLELLSPAQRPLQIT
RDLSAFWRGAYREVQKEMKGRYPKHVWPDDPANTAPTRRTKKYS
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgctacaatgcagcgcagagaaagttaaccccgtggagccgtttgtgacgtccttgccc
gttgccgccgtattgcctgaattgttgacagccctaaaaaccgcgccgcaggtcttgttg
tccgcgcctaccggggcggggaaatctacctggctgccgttgcaactcctgcaacaaagc
ccggttgctggaaaaattctcctgcttgaaccgcgtcgtctggcggcgcgtaatgtcgcg
cagcgtctggcagaagggttgaatgaaaaacctggcgaaacggtaggctatcggatgcgc
gcgcaaagctgcgtggggccgcgtacccggctggaagtggtgaccgaaggcgtgttgacc
agaatgattcagcgcgatcccgaactcagcggcgtaggactggtgatactggatgagttt
catgagcgcagtctccaggcggatttagcattggcgttgctgctggacattcagcaaggg
cttcgtgatgatctcaaactgctaatcatgtctgcaacgctggataacgacaggctttgt
cagcgactgcccgatgcgccggtaatcctttcggaggggcgtgcgtttccggttgagcgg
cgttatcagccgctcgcggcgcatttgcgttttgaagacgccgtcgcgatggcgacggcg
gaactgttgcgtaatgaaagcggttcgttgttgctctttttacctggtacaggcgaaatt
cagcgcgttcaggaacatctggcatcgcgggtaggaaatgatgtcctgctttgtccgctg
tatggcgcattatccctggaggcgcagcgcaaagcgattcttcccgccccagtggggatg
cgtaaagtcgtgctggcaactaacattgccgaaaccagtttgacgattgaaggtattcgc
ctggtggtcgacagcgctcaggagcgcgtggcgcgattcgatgcgcgaacgggactgacg
cgcctgattacgcaacgcataagccaggcctcaatgacgcagcgtgcgggacgtgcagga
cgactggcgccgggcatctgtttgcatctgctggcaaaagagcaggcagagcgggcggcg
gcgcaaagcgaaccggaaatcttacacagcgatctctctggtttgttgatggaaatattg
cagtggggatgctccgacccggcgtcactgttctggctggatacaccgccggaagtaaat
attcaggccgcccgtcgtttattagtgatgttaggcgcgctggacggcgaacaattaaac
gcacgtggccggaaaatggcgacagcaggcaacgatccgcgcctggcggcgatgttagtc
aacgccgacgagggcgatagcgccgctaccgccgctatgctcgcagcacttcttgaagaa
ccgccgagaggtatcggtacggatttaagcgtcgcattttcacgcaggcaaccaggctgg
cagcagcgcagtcagcagcttttaaaacggttgaatattcgcagtggcgaaccggatagc
gcgcttatcgcgccgctgctggccagagcattcagcgatcgaattgcgcggcgtcgcggt
caggaaggacgctatcaattagccaatggcatgggggcgaggctggatgcggatgatgcg
ctgggacgccatgaatggttgattgcgccgctgttgctgcaaggtagcgcctcgccggac
gcccgaatattgttagcgcagccgctggatatggcttcgctggttcaggcgtgtcctgat
ttactacagcaatccgatacgattgaatgggacgaggcgctgggaacgttgaaagcgtgg
cgcagaatgcgtatcggtcaactgacggtaaatgtgcagccgctggcgaagccatcggaa
gaggaacttcatcaggcgatgctgaacggcattcgggataaaggcctggcggtactcgac
tggacgccggaggcggaacagttccgtctgcgtctgcactgtgcggcgaaatggctgccg
gaatacgactggcccgcggtggatgaggcatcgctgttggcgacgctggaacgttggctg
ctgccgcacatgtcaggcgtacagtcgttacgagggctaaaatccctgaacgttaatcag
gcgttacggggactgcttgactatcccatgctgcaacgtctggatagtgaactgcctggg
cattacactgtgccgacgggaagccgaataacgattcgttatcatgaagataacccgccc
gcgctggcggtcagaatgcaggaaatgttcggcgaggcgagtacgccgacgcttgcgcag
gggcgagtgccgctggtgctggaactgctttcgccggcgcagcggccgctacaaattacg
cgcgatttaagcgctttctggcggggggcgtatcgcgaagtgcaaaaagagatgaagggc
cgttaccccaaacatgtctggccggacgatccggcgaatacggccccaacgcggcgcacg
aaaaaatactcgtga
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