Salmonella bongori N268-08: A464_236
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Entry
A464_236 CDS
T02733
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sbz
Salmonella bongori N268-08
Pathway
sbz03030
DNA replication
sbz03430
Mismatch repair
sbz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A464_236
03430 Mismatch repair
A464_236
03440 Homologous recombination
A464_236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbz03032
]
A464_236
03400 DNA repair and recombination proteins [BR:
sbz03400
]
A464_236
Enzymes [BR:
sbz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A464_236
DNA replication proteins [BR:
sbz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A464_236
DNA repair and recombination proteins [BR:
sbz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A464_236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AGR57422
UniProt:
S5NAU8
LinkDB
All DBs
Position
250663..254097
Genome browser
AA seq
1144 aa
AA seq
DB search
MIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGAGHGAGIKPIVGADFHVRSEL
LADELTQLTVLAANNTGYQNLTLLISKAYQRGYGAEGPVIDREWLAELNEGLILLSGGRM
GDVGRSLLRGNNALVEECVAFYEAHFPDRYFLELIRTGRQDEETYLHAAVALAEARGLPV
VATNDVRFLESEDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYMRSIDEMCELFSDIPEA
LENTVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDYLVKKAKEGLEERLAFLFPDEEERKK
RRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGPGRGSGAGSLVAYALKI
TDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVADMYGRDAVSQIITFGTM
AAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQLPEIYEADEEVRALID
MARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQFDKSDVEYAGLVKFDF
LGLRTLTIINWALEMINKRREKNGEPPLDIAAIPLDDKKSFDMLQRSETTAVFQLESRGM
KDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREELSYPDVQWQHESLKPV
LEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEMAKQRSVFEEGAKKNGI
DGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEK
VVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKGVGEGPIEAIIEARNNG
GYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMNSLGDALKAADQHAKAE
AIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLYLTGHPINQYLKEIERY
VGGVRLKDMHPTERGKVTTAAGLVIAARVMVTKRGNRIGICTLDDRSGRLEVMLFTDALD
KYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKYARGLAISLTDRQIDDQ
LLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSDRLLNDLRGLIGSEQVE
LEFD
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatgggttggcaaaaaccgggccgctggtgaaaaaggcggcctcattaggtatg
cctgcgctggcgatcaccgattttaccaacctctgcggtctggtgaagttctacggagcg
ggtcatggtgcaggcattaaacccattgtcggcgctgactttcatgttcgtagcgagttg
ttggccgatgaactgacgcagttgaccgtactcgcggccaataacacaggttatcaaaac
ctgacgttattgatatcaaaagcctatcagcgcggttacggtgctgaaggcccggtaatt
gaccgggaatggctggcggaactcaacgaagggttgattctgctgtctggcgggcgaatg
ggcgacgtcgggcgcagcctgttacgtggcaataatgccctggttgaagagtgcgtggca
ttctatgaagcgcacttccccgatcgttactttctcgaactgatccgtaccggcaggcaa
gacgaagaaacatatctgcacgctgctgtcgcactggcggaggcgcgggggttgccggtc
gtagcgaccaacgatgtccgtttccttgaaagcgaggattttgacgcgcatgaaattcgt
gtcgcgatccacgacggtttcacgctggacgatcctaaacgtccgcgaaactactcaccg
cagcaatatatgcgcagcatcgatgagatgtgtgagctgttttccgatattccggaagcg
ctggaaaacactgttgagattgccaaacgttgtaatgtcacggtgcgtttgggtgagtat
ttcctgccgcagtttccgaccggtgatatgaccactgaagactatctggtcaaaaaagcg
aaagaggggcttgaagagcgcctagcgttcctgttcccggatgaagaagaacgtaaaaaa
cgccgtccagagtatgatgagcgcctggatattgaactccaggttatcaaccagatggga
ttccccggctacttcctcattgtaatggagtttatccagtggtcaaaagataacggagtg
ccagtggggccggggcgtgggtccggggctggatcgctggtggcctacgcgctgaaaatt
accgaccttgatccgctggaatttgacctgctgttcgaacgtttccttaacccggagcgt
gtctcgatgcctgactttgacgttgacttctgtatggagaaacgcgatcaggtgattgag
cacgtcgcggacatgtacggacgtgatgcagtatcgcaaattattaccttcggtacgatg
gcggcgaaagcggttatccgtgacgtggggcgtgtgttgggccatccttatggctttgtg
gaccgtatttccaagctggtgccgcctgatccgggcatgacgctggcaaaagccttcgaa
gcggaaccacaactgcctgagatttatgaggcagatgaagaggtcagagcgctgatcgac
atggcgcgtaagctggaaggcgtcacgcgtaacgccgggaagcacgccggcggcgtggta
attgcgccgaccaaaattactgactttgcgccgctttactgtgatgaagagggcaaacat
ccggttactcagtttgataaaagtgacgtggaatacgccgggctggtgaagtttgacttc
ctcggcctgcgtaccctgaccatcatcaactgggcgctggagatgatcaacaagcggcgc
gagaagaacggcgagccgccgctggacatcgccgccattccgctggacgataaaaaaagc
ttcgacatgctgcagcgctcggaaaccacggcggtgttccagcttgaatcgcgcggcatg
aaagacctgatcaaacgtctgcagccagactgctttgaagatatgatcgccctcgtggcg
ttgttccgtccaggtccgttgcagtcggggatggtcgataactttattgaccgtaagcat
ggtcgcgaagaactctcttatccggacgttcagtggcagcatgaaagcctgaaaccggta
ctggagccgacctacggcattatcctgtatcaggaacaggtgatgcagatagcgcaggta
ctttccggctataccctcggtggcgcggatatgctgcgtcgtgcgatgggtaagaaaaag
ccggaggagatggccaaacagcggtccgtctttgaggaaggcgcgaaaaagaatggtatt
gacggcgaactggcgatgaaaatctttgacctggtggagaaattcgccggttacgggttt
aacaaatcacactctgccgcttatgcgttagtgtcttaccagacgctatggctgaaggcg
cactatccggcggaatttatggcggcggtgatgacagccgatatggacaacaccgagaaa
gttgtaggcctggtagatgaatgctggcggatggggctaaaaattctgccgccggatatt
aactccggattataccatttccacgttaacgatgatggggagattgtctacgggattggc
gcgatcaaaggcgtcggcgaagggccgatcgaggcgattattgaggcgcgtaacaatggc
ggctattttcgcgagttgtttgatctgtgtgcgcggaccgataccaaaaagctcaaccgc
cgggtgctggaaaaactgatcatgtccggggcgtttgatcggttgggaccgcaccgcgcc
gcgctgatgaactcgctgggcgatgcgctaaaagctgccgatcagcacgctaaagcggaa
gccatcgggcaggcggatatgttcggcgtgttggcggaagagccggagcaaattgaacaa
tcctacgccagctgccagccgtggccggagcaggtggtgttagatggggaacgtgaaacg
ttggggctgtacctgacgggccaccccatcaatcagtatctaaaagaaattgagcgctat
gtcggcggggtaaggctcaaagacatgcatccgacggaacgtggtaaagttaccacggct
gcggggctcgtaattgccgcaagggttatggtcaccaagcgtggcaatcgtatcggcatc
tgtactctggatgaccgttccgggcgtctggaagtgatgttatttaccgacgcgctggat
aaatatcagcagctgctggaaaaagaccgcatacttatcgtcagcggacaggtcagcttt
gatgacttcagtggggggcttaaaatgaccgcccgcgaagtgatggatattgacgaagct
cgcgaaaaatacgctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccag
cttttaaaccgactccgtcagtctctggaaccccaccgctcggggaccattccagtacat
ctctactatcagagggcggatgcgcgcgcgcggctgcgttttggcgcaacgtggcgtgtc
tctccgagcgatcgtttattaaacgatctccgtggcctcattggttcggagcaggtggaa
ctggagtttgactaa
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