Salmonella bongori N268-08: A464_3009
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Entry
A464_3009 CDS
T02733
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sbz
Salmonella bongori N268-08
Pathway
sbz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A464_3009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbz03400
]
A464_3009
Enzymes [BR:
sbz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A464_3009
DNA repair and recombination proteins [BR:
sbz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A464_3009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
Helicase_RecD
UvrD_C_2
Viral_helicase1
SH3_13
AAA_11
UvrD-helicase
AAA_22
SLFN-g3_helicase
nSTAND3
MukB
AAA_16
AAA_28
CbiA
T2SSE
FtsK_SpoIIIE
SRP54
DEAD
DUF6079
UvrD_C
TrwB_AAD_bind
NPHP3_N
NTPase_1
Bcl-2
ATPase
Motif
Other DBs
NCBI-ProteinID:
AGR60193
UniProt:
S5MZR5
LinkDB
All DBs
Position
complement(2994945..2996780)
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AA seq
611 aa
AA seq
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MTIQERLLEAVRQKLLRPIDAQFALTVAGYDDPAVTLAAALLSRDAGDGHVCLPLSRLTL
TEEAHPLLVSWISETDTPIDWKKRLLASAAVSGGDSPAPLILCGDRLYLNRMWCNERTVA
RFFNEVNQDVEVDEAQLARILDTLFPPTDEVNWQKVAAAVALTRRISVISGGPGTGKTTT
VAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGAALRQLPLTDAQKKRIPEDASTL
HRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPPHGRVIFLGDRDQ
LASVEAGAVLGDICAYVNAGFTAERARQLSRLTGSTIPAGAGTQAASLRDSLCLLQKSYR
FGSDSGIGKLAAAINCGDRSAIQAIFQQGFSDIEKRTLQSSDDYAGMLDEALAGYGRYLR
LLHEKAAPEALLQAFSDYQLLCALREGPFGVSGLNDRIEQAMVQQRKIQRHPHSRWYEGR
PVMIARNDSALGLFNGDIGIALDRGQGLRVWFAMPDGTIKSVQPSRLPEHETTWAMTVHK
SQGSEFEHAALILPSQRSPVVTRELVYTAVTRARRRLSLYAEERVLAGAIVTRTERRSGL
SALFDEVSRIE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacaatccaggagcggttactggaagccgtcagacaaaaattattacggcccattgat
gcccagtttgctttgaccgtcgccggttatgatgatcccgccgtgacgctggcggcagcg
ttgctaagccgtgatgcaggagacggccacgtctgtctgccgctgtcgcgtctgacgtta
acggaggaggcgcatcctttactggtttcgtggataagcgaaacggatacgccaatcgac
tggaaaaaacgtttgctggcgtctgcggcggttagcggtggcgatagccccgcgccgtta
attctgtgcggggatcgtctctatttgaatcgcatgtggtgcaatgagcgtacggtcgcg
cgcttttttaacgaggttaaccaggacgtcgaggttgacgaagcgcaacttgctcgtatt
ctggatacacttttcccgccgacggatgaggtaaactggcaaaaagtggccgccgccgtg
gcactcactcgccgtatttcggtgatttccggcggccctggcaccggtaaaaccacgacc
gtcgcgaagctgctggcggcattaattcaaatggcggatggcgaacgttgccgtatccgg
ctggcggcgccgacgggaaaggcggccgcacgcctgacggagtcgcttggcgcggcgttg
cgccagcttccgctgaccgatgcgcagaaaaaacggataccggaggacgccagtacgctg
caccgcctattaggcgcacagcccggcagccagcgattacgacaccacgcgggtaatcca
ttgcatctggatgtgctggtggtcgatgaagcgtcaatgattgatttaccgatgatgtcg
cgtttgattgacgcgctgccgccacatggtcgggttattttccttggcgatcgcgatcag
ttggcatccgttgaggcgggcgcagtattgggcgatatttgcgcctatgttaatgctggt
ttcacggcggagcgtgcccggcaattgagccgcctgacgggaagtacaattccggccggt
gccgggacacaagccgcgtctttgcgcgatagcctctgtttactgcaaaagagctaccgt
tttggcagcgattccggtatcgggaaattggctgcggccattaactgcggtgacagatcg
gcaatccaggctatttttcagcaggggtttagcgatattgaaaagcgcacattgcaaagt
agcgacgattatgccgggatgctggatgaagcgctggcggggtatggtcgctacttgcgg
ttgctgcatgagaaagcggcgccagaggcgctccttcaggcattcagtgattatcaactg
ctttgcgcgttgcgcgaaggcccgtttggtgtaagtgggttgaatgaccgcattgagcag
gcaatggtccagcagcgtaaaattcaacggcatcctcattcccgctggtatgaggggcgg
ccagtgatgattgcgcgcaatgatagcgcgttggggttatttaacggcgatattggcatt
gcgctcgatcgcggacaggggctgcgcgtttggtttgcgatgccggacggcacgatcaag
tccgttcagcccagccgcttgccggagcacgaaaccacctgggcgatgacggtacataaa
tcacaggggtcggagtttgagcacgccgcgctgattctacccagccagcgttcaccggta
gttacgcgagaattagtgtataccgccgttacgcgcgcgcggcgacggttatcactgtac
gctgaggaaagggtactggcaggcgcgattgtgacgcgcacggaacggcgcagcggatta
tcggccttattcgacgaagtcagtcgcatcgaataa
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