Salmonella bongori N268-08: A464_3010
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Entry
A464_3010 CDS
T02733
Name
(GenBank) Exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
sbz
Salmonella bongori N268-08
Pathway
sbz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A464_3010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbz03400
]
A464_3010
Enzymes [BR:
sbz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A464_3010
DNA repair and recombination proteins [BR:
sbz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A464_3010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AGR60194
UniProt:
S5N004
LinkDB
All DBs
Position
complement(2996777..3000322)
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AA seq
1181 aa
AA seq
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MNDVAEALDPLRLPLTGERLIEASAGTGKTFTIAALYLRLLLGLGGAAAFPRPLTVEELL
VVTFTEAATEELRGRIRSNIHELRIACLRESTDNPLYASLLAEINDKKQAAQWLLLAERQ
MDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPRDIA
QVVFDAWKGPNALLKEIDRYLQGEAPVIKAPPSQEETLASRHEQILARINQVKQQWREAV
SELEALLESSGIDRRKFNRGNQAKWIEKITTWSQEETKNYQLPEALGKFSQRFLAERTKA
GGVTPRHPLFVAIDNLLGEPLSIKDLVLTRALSEIRETVAQEKRRRGELGFDDMLSRLDA
ALRSESGEALAAAIRARFPVAMIDEFQDTDPQQYRIFRRVWHHQPDTALLLIGDPKQAIY
AFRGADIFTYMKARSEVSAHYTLDTNWRSAPGMVNSVNKLFSQMDDAFMFRDIPFNPVKF
APGNQSLQFKVDGALQPAMTLWLMEGESCSSGDYQSYMAQVCATQIRDWLRAGQTGDALL
MKGDSSQPVRASDISVLVRSRREAALIRDALTLLAIPSVYLSNRDSVFETLEAQEMLWVL
QAVMAPERENTLRSALATSMMGLTALDIETLNNDENAWDAVVEEFDGYRQIWHKRGVMPM
LRALMSARNIAENLLATAGGERRLTDILHISELLQEAGSQLESEHALVRWLAQHILEPDS
NASSQQLRLESDKHLVQIVTIHKSKGLEYPLVWLPFITHFRVQDQAFYHDRHSYEAVLDL
SHAEESIELAEAERLAEDLRLLYVALTRAVWHCSLGVAPLVRRRSDKKGETDVHQSALGR
LLQKGEPLDAAGLRTCIEALCDEDIMCRTPGNTDNERWQTAAASLTELSARTLQRLPYDS
WRVTSYSGLQQRGHSVAQDLIPRLDIDAAGVGEVTEAPAMTPHHFPRGASPGTFLHSLFE
ELDFTQPIDPQWVQEKLELNGFETQWEPVLTQWLDTVLHVPLNETGVSLSLLTAREKQVE
MEFYLPIVQPLTARELDALIRRYDALSAGCPPLDFTQVRGMLKGFIDLVFRYEGRYYLLD
YKSNWLGEDSAAYTQTAMAAAMQAHRYDLQYQLYTLALHRYLRHRMANYDYERHFGGVIY
LFLRGVDSERPQQGIFTTRPAVALINQLDEMFAGEMSEEAQ
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgtcgccgaggcccttgatcctctacgcttaccccttacgggcgagcgtctg
attgaagcgtcagcaggcacaggcaaaacgtttactatcgctgcgctatatttgcgtcta
ctgcttggtcttggcggagcggctgcatttccccgtccgctaaccgttgaagagctgttg
gtggtcacttttacggaggctgctaccgaagagctacgtgggcgaatccgcagcaatatc
catgagctgcgtatcgcttgcctgcgggagagtacggataatccgctgtacgccagtttg
ctggcggaaattaacgacaaaaagcaggccgcacaatggttattactggctgaacgacaa
atggacgaagcggcggtctttaccatccacggcttttgccaacgtatgctcagcctgaac
gcctttgaatccggcatgttgtttgagcaacagcttattgaagacgaatctctgttgcgc
tatcaggcctgcgctgatttctggcgtcgtcattgttatccgttgccacgtgacattgcg
caggtggtttttgacgcgtggaaagggccgaacgcgctattaaaagagattgatcgctat
ctgcagggcgaagcaccggttattaaagcgccgccatcgcaggaggagacgctggcatcg
cgtcatgagcagatcctggcgcgcatcaaccaggtaaagcaacagtggcgtgaggcagtt
agtgagctggaagcactgctcgaatcatccgggatcgatcgcagaaaattcaaccgtggt
aatcaggctaaatggatcgaaaaaattaccacgtggtcgcaagaagagacaaaaaactat
caattacctgaagcgttgggaaaattttcacagcgttttttagctgagcgtaccaaagcg
ggtggcgtgacgccccggcaccccttgtttgtcgcgattgataacctgctgggcgaacca
ctatcgatcaaagatctggtccttaccagagcgctctcggaaatccgggaaacggtggct
caggaaaaacggcggcgcggcgagttgggatttgacgatatgctcagccgtttagatgcg
gcgctgcgtagtgaaagcggcgaagcgctggcagcggcgattcgtgcccgtttcccggtg
gcgatgatcgacgaatttcaggataccgatccacaacaatatcgtatttttcgccgcgtc
tggcaccatcagcccgatacggcactattacttatcggcgatcctaaacaagcgatttac
gcgtttcgcggcgcggatatctttacctacatgaaggcccgtagcgaagtgagcgcgcac
tatacgctcgacacgaactggcgctccgcgccgggaatggtgaatagcgttaacaagctg
ttcagtcaaatggacgacgcctttatgtttcgcgacattcccttcaatccggtaaagttt
gcgccaggaaaccagtcgctgcaatttaaggtggatggcgctcttcagcctgcaatgacc
ctgtggctgatggagggggaaagctgtagttcgggcgactaccaaagctatatggcgcag
gtatgcgccacgcagattcgcgactggttgcgcgccggacaaacgggcgacgcgctgctg
atgaagggcgattcatcgcagcctgttcgcgcctcggatatcagcgtactggtgcgcagc
agacgggaagccgctctgatacgggatgcgctgacattactggctatcccctccgtctat
ctttctaaccgcgacagtgtgttcgaaacgcttgaagctcaggaaatgctatgggtatta
caggcagtgatggcgcctgaacgcgagaatacgctgcgtagcgctctggcgacatcgatg
atggggctaaccgctctggatattgaaacgcttaataatgatgaaaatgcatgggatgcc
gtcgtcgaagagtttgatggctaccggcagatctggcataaacgcggtgtgatgcctatg
ctgcgcgcgctaatgtcggcgcgcaatattgctgaaaatctgctggcgacggcgggaggc
gagcgtcggttgacggatattctgcatatcagtgaactgttgcaggaagccggttcgcaa
ctggaaagcgaacatgcactggtgcgctggctggcgcaacatattcttgaacccgatagc
aatgcttcaagccagcagctgcgcctggaaagcgacaagcatctggtgcaaatcgttacc
attcataaatcgaaaggtctggaatatccgctggtctggctaccttttatcacgcatttt
cgtgtgcaggatcaggccttttatcacgacaggcactcttacgaagccgtactggatctc
agtcacgctgaagaaagcatagaattggcagaagccgaacgcctggcagaagatctgcgc
ttactgtatgtcgccctgacccgtgcagtgtggcactgtagcctcggcgtcgcaccgttg
gtacggcgtcgtagtgataaaaaaggcgagacagatgtccaccaaagcgcgttaggtcga
ctcctgcaaaaaggtgaaccactggatgccgcaggcctccgcacttgtattgaggcgcta
tgtgatgaagatattatgtgtcgaacgccaggcaatacagacaatgagcgctggcaaact
gccgcggcatcactcacggaacttagtgccagaacgctacaacgtctgccgtatgatagc
tggcgcgtcaccagttattctggtttgcaacaacggggacatagcgtggcacaagacctt
attcctcgcctcgatattgacgccgcaggcgtcggcgaggtgacggaagctccagccatg
acgccgcatcactttcctcgtggggcttcgccgggaacatttttgcacagtctgtttgaa
gagcttgattttacgcagcccatagaccctcaatgggtgcaggaaaaacttgaactgaac
ggctttgagacgcaatgggaacccgtgcttacgcaatggctggacaccgtgttacacgtt
ccccttaacgagacgggcgttagcctgagtttgcttaccgcgcgcgaaaaacaggtagaa
atggagttttatctgccgatcgtccagccgctgaccgccagagagttggatgcgttgatt
cgtcggtacgacgcgctttcagctggctgtcctccgctggatttcacccaggttcgcggc
atgttaaaaggctttatcgacctggtgtttcgttatgaaggacgttattacctgctcgac
tataaatctaactggctgggtgaggatagcgccgcttatacccaaacggcgatggccgca
gcgatgcaggcgcatcgctatgatttgcagtatcagctctatacgctggccctgcaccgt
tatctgcgtcatcgtatggcaaattacgactatgaacgccattttggcggtgttatctat
cttttcttgcgcggggtggatagcgagcgtccgcaacagggcatttttaccactcgccca
gcggtagcgttgattaatcaactggatgagatgtttgcaggtgaaatgagtgaggaggcg
caatga
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integrated database retrieval system
