Salmonella bongori N268-08: A464_3052
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Entry
A464_3052 CDS
T02733
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sbz
Salmonella bongori N268-08
Pathway
sbz03410
Base excision repair
sbz03430
Mismatch repair
sbz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A464_3052
03430 Mismatch repair
A464_3052
03440 Homologous recombination
A464_3052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbz03400
]
A464_3052
DNA repair and recombination proteins [BR:
sbz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
A464_3052
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A464_3052
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A464_3052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
PEP-utilizers
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AGR60236
UniProt:
S5MU06
LinkDB
All DBs
Position
complement(3045604..3047337)
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AA seq
577 aa
AA seq
DB search
MKQQRQLRRREADETADLPAELPPLLRRLYASRGVRSARELERSVKGMLPWQQLSGIDNA
VEILYDAFREGLRIIVVGDFDADGATSTALSVLGMRALGCDNISYLVPNRFEDGYGLSPE
VVDQARTRGAQLIVTVDNGISSHAGVAHAKALGIPVIVTDHHLPGDTLPDAEAIINPNLR
DCEFPSKSLAGVGVAFYLMLALRTFLRDKGWFDERGIAPPNLAELLDLVALGTVADVVPL
DANNRILTWQGLSRIRAGKCRPGIKALLEISNRDPQQLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNLGEARVLASELDALNQTRKEIEQGMQAEALVLCEKLERSCDVLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP
DLMIKFGGHAMAAGLSLEAHKFELFQQRFGELVTEWLDPALLQGEVISDGPLSAAEMSME
VAQVLRDAGPWGQMFPEPLFDGRFRLLQQRLVGERHLKVMVEPIGGGPLLDGIAFNVDTT
CWPDNSVREVELAYKLDINEFRGNRSLQIIIDDIWPL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaacagagacaacttcgtcggcgcgaggctgatgagacggcggatctacctgcc
gagcttcctccattactgcgacgtttatatgccagccggggcgtacgtagcgctcgcgag
ctggagcgcagcgtgaaaggaatgctgccttggcagcagcttagcggtattgataacgcg
gtggagatcctctacgacgcttttcgtgaagggcttcgcattattgttgttggcgatttt
gacgctgacggcgcgaccagtactgccttaagcgtattgggaatgcgtgcgctgggatgt
gataacatcagttatctggtgcctaatcgctttgaagatggctatggtttaagcccggaa
gtggtcgatcaggccaggacgcgtggcgcacagcttattgtcacggtagacaacggtatt
tcctcccacgcaggcgtagcgcacgccaaagcgttgggaatcccggtgattgtgaccgat
caccatctccctggcgacacgttgccggatgccgaagcgattattaatcccaatctacgc
gactgcgagtttccctctaagtcgctggcgggcgtcggtgtagcgttttatctgatgctg
gcgttacggacatttttacgcgataaaggatggtttgacgaacgcggtatcgcgccgcca
aacctggcggagttactggatttagtggcgttgggaacggtagcggacgtggtgccgctg
gatgccaacaaccgtattctgacatggcaagggttaagtcgtattcgtgccgggaaatgt
cggcccggaattaaagcactgctggagatatcgaatcgcgatccgcaacagctcgccgcc
agtgatttaggcttcgctctggggccgcgtctgaatgccgccggcaggctggacgatatg
tctgtcggagtagcattactcttatgcgataacctcggcgaagcgcgggtcctggccagc
gaactggatgcgcttaaccagacgcgcaaagaaattgaacaggggatgcaggcggaagcg
cttgtcctgtgcgaaaagcttgagcgcagttgtgatgtgctgcctggcggtctggcgatg
tatcatcctgaatggcatcagggcgtggtggggattctggcgtcacgcattaaagagcgt
tttcatcgtccggtgatcgcctttgcccctgctggcgacggcacgcttaaaggctcaggc
cgttctattcaggggttgcatatgcgcgatgcgctggaacggttggatacgctctaccct
gacctgatgatcaaattcggcggtcatgcaatggcggcgggattgtcgctggaagcgcat
aaattcgagttgttccagcaacgtttcggtgagctggtgacggagtggctcgatcccgca
ctgctgcaaggcgaggtaatctccgatggtcccttaagcgcggcggaaatgtctatggaa
gtggcgcaggtgctgcgggatgccggaccgtggggacagatgtttccggagccgttattt
gatggccgtttccgcctgctgcaacagcgcctggtgggcgagcgtcacctcaaggtgatg
gtggagccgatcggcggcggtccgttgctggatggtattgcctttaatgtcgataccact
tgttggccggataacagtgtgcgggaagtggaactggcttataaactggacattaacgag
tttcgcggcaaccgtagtttacagattattatcgatgatatttggccgctatga
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