Salmonella bongori N268-08: A464_352
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Entry
A464_352 CDS
T02733
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sbz
Salmonella bongori N268-08
Brite
KEGG Orthology (KO) [BR:
sbz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbz03400
]
A464_352
DNA repair and recombination proteins [BR:
sbz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A464_352
Archaeal homologous recombinant proteins
A464_352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
T2SSE
nSTAND3
ABC_tran
AAA_21
FlxA
AAA_15
cobW
TsaE
ABC_ATPase
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGR57538
UniProt:
S5MSK2
LinkDB
All DBs
Position
complement(380497..383637)
Genome browser
AA seq
1046 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LNTVSQSQNDLMTRDTAECLAEVEFEVKGEAWRAFWSQNRARNQPDGNLQAPRVELARCS
DGKIFADKVKDKLEMTAALTGLDYGRFTRSMLLSQGQFAAFLNAKAKERAELLEELTGTE
IYGQISAQVFERHKAARLELEKLQAQANGVSLLAEEQLQQLEVSLQALTDEEKRLLARQQ
TQQQHLHWLTRRNELQTELHARQQTQYAVQEAHEKAQPQLAALTLAQPARQLRPHWERIQ
EQTIAVERVRQQINEVNARLQNTLRQRQRIRACAHRQSALLEAAGQQLKAWLEEHDGIRE
WHSELAGWRALLTQQSSDREQLRQWQQQLAADTRQLDTLPPTTLDLTPQTLAEAKALHTR
QRPLRQRLAALQGQIAPNQKRQALLQAAIARYQQEQAHFTQRLTDKRQRYKAKAQELADV
RIICEQETRIKDLESQRARLQPDQPCPLCGSTTHPAVAAYRDLELSVNQTRRETLEKEVN
TLAEEGAALRGQLDALTQQLQRDESEARSLLQEEQALTEAWQTLCAALGVQLQPLEDLSG
WLAAAEEHEQQLYQLSQRHALQSQIAAHTGQVAQFTARIAQRQMALMAELSRYKLPFPAP
EDESLWLNTRAEDAKMWQQRQAELADLQMQIDRLSPLLETLPQTDTITPDDDLPLDNWRQ
VHDECVSLQSQLYTLQQQASQEQQRALEATAHFDAALTKSPFDNQAAFLAALLDEETIAR
LEKQQQALESQLQQAKALSAQSAQALALHQQHPPAGLDPTSPAEHIPVILTQLAQQLRDT
TTRQGEIRQQIKQDVDNRQHHRNLMAAIEKASQQVEDWGYLNALIGSKEGDKFRKFAQGL
TLDNLVWLANHQLTRLHGRYLLQRKASDALELEVVDTWQADAVRDTRTLSGGESFLVSLA
LALALSDLVSHKTRIDSLFLDEGFGTLDSETLDAALDALDALNATGKTIGVISHVEAMKE
RIPVQIKVKKINGLGYSKLDKTFAVE
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagtttgcggctgaaaaatctaaactcgctgaaaggagaatggaaggtc
gactttaccgccgaaccttttgccagtaatggattattcgccattaccggcccgaccggc
gcaggaaaaacaaccctgcttgatgccatctgcctggcgctgtaccacgaaacgccgcgc
ctgaatacggtatcgcagtcgcagaacgatttaatgacacgcgatacggcagagtgtctg
gctgaagtggaatttgaggtcaaaggcgaagcctggcgcgccttctggagccagaatcgc
gcccgtaatcagcctgacggcaatctacaagccccgcgcgtagagctggcgcgctgttca
gacgggaaaatttttgcagataaggtcaaggataagctggagatgaccgccgccctgacc
gggctggactatggtcgctttacccgttcgatgctgttatcgcaggggcagttcgccgcc
tttcttaacgccaaagcgaaagagcgcgcggagctgctggaggaactgacgggcactgag
atttacgggcagatttccgcacaagtgtttgagagacacaaagccgcccgtctcgaactg
gaaaagttacaggcgcaggccaacggcgtatcgctgctggcagaagaacaattacaacag
cttgaagtcagtttgcaggcgcttactgacgaagagaaacgtctgctggcccgccagcag
acgcagcaacagcatcttcactggctgaccagaagaaatgaattgcagactgagttacac
gcccggcaacaaacgcagtacgcagtacaagaggcacacgaaaaagcgcagccccagtta
gcggcgctgacactggcgcaacctgcccgccagttgcgcccacactgggaacgcattcag
gaacaaaccatcgccgttgagcgggtgcgtcagcaaattaatgaagtaaacgctcgctta
caaaacacgcttcgtcagcgccagcgtatccgcgcctgtgcgcatcggcaatccgcactg
ctggaggccgccggacagcagctaaaagcatggctggaggaacatgatggtattcgcgag
tggcacagcgaactggcaggctggcgggcgttattaacgcagcaatccagcgacagggaa
cagttgcgccaatggcaacagcaactggcagccgatacccggcaacttgacacactgccg
ccaaccacactcgacctcacgccacaaacgttggctgaagccaaagcattacataccaga
caacgtccgctacgccagcgtctcgccgcgcttcaggggcaaatcgcgccgaaccaaaag
cgccaggcgctgctacaggcagccatcgcgcgttatcagcaggaacaggcgcacttcacc
cagcggctgacggataagcgccaacgttataaagccaaagcgcaggaacttgcggatgtg
cgtataatttgcgaacaggaaactcgcatcaaagatctggaaagccagcgggcgcgttta
cagccggaccagccgtgtcccctttgcggatcaacgacgcaccctgccgtcgccgcctat
cgggatctggaattaagcgtaaaccaaacccgccgcgaaacgctggaaaaagaggtcaac
actctggcggaagaaggtgcagcgctacgagggcaattagacgccttaacacaacaatta
cagcgggacgaaagcgaggcgcgttcgcttttgcaggaggagcaagcacttactgaagca
tggcaaacgctatgcgccgcgctgggcgttcagcttcagccgctggaggatctttctggc
tggctggctgccgcggaagaacatgaacagcaactctatcagctaagccagcgccacgct
ctacaatcgcaaatcgccgcccataccggacaggtagcccagtttacggcgcgaattgca
cagcgtcagatggcattgatggccgagttatcacgatataaacttccttttcctgcacca
gaagacgagtcgctgtggctgaacacacgtgccgaagacgccaaaatgtggcagcaacgc
caggcggagctggctgatttacaaatgcagatcgaccggctttccccactgctggaaacg
ctgccgcagacggataccataacgccggacgacgacctgccgctggataactggcgacag
gtacatgatgagtgcgtgtcattgcaaagccagttatacaccttacagcagcaagcgtcg
caggaacagcagcgcgctcttgaagcgacagcgcattttgacgccgcgctaacaaagagc
ccatttgacaaccaggccgcgtttctggcggctctgctggatgaagagacgatcgctcgt
ctggaaaaacagcagcaggcgttggaaagccagttacaacaagcgaaggcgttaagcgcg
caatctgcgcaggcgctggctctacaccaacaacacccgcccgccgggcttgatccgacc
agtcccgcggagcatatcccggtgatactgacgcaactggcgcagcaactgcgtgatacc
accacgcgtcagggagaaattcgccaacaaattaaacaggatgtggataaccggcagcat
caccggaatctaatggcggccattgaaaaggcctctcagcaggttgaagactggggttat
ctcaatgcgcttatcggctctaaagagggcgataaatttcgtaaattcgcccagggactc
acactggataatctggtctggctggcgaatcatcagctcacccgtctgcatggccgttat
ttattacaacgcaaagccagcgacgcgctggagctggaagtcgtggatacctggcaggcc
gacgctgtacgcgatacgcgtacgctctccggcggcgaaagtttcctggtcagcctggcg
ttggcgctggcgttatccgatttggtaagccataaaacgcgcattgattccttgttcctg
gacgaaggcttcggcacgctcgatagcgaaacgctggacgccgcgctggatgcgctcgac
gctctgaatgccaccgggaagaccataggcgttattagccatgtggaagccatgaaagaa
cgtattccagtgcaaataaaagttaaaaaaatcaatggactgggttatagcaaactggac
aaaacatttgcagtagagtag
DBGET
integrated database retrieval system
