Salmonella bongori N268-08: A464_3803
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Entry
A464_3803 CDS
T02733
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sbz
Salmonella bongori N268-08
Pathway
sbz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sbz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A464_3803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbz03400
]
A464_3803
Enzymes [BR:
sbz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A464_3803
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A464_3803
DNA repair and recombination proteins [BR:
sbz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A464_3803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AGR60987
UniProt:
S5NL61
LinkDB
All DBs
Position
complement(3787705..3788514)
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AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRLSDTPVLSVQRRAKYLL
LELPDGWIIIHLGMSGSLRILSESLPAEKHDHVDLVMSNGKILRYTDPRRFGAWLWTKEL
EGHNVLAHLGPEPLSEAFNGEYLQQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAG
IHPDRLASSLSTEECDLLARVIKAVLLRAIEQGGTTLKDFLQSDGKPGYFAQELQVYGRK
GEPCRVCGTPIVATKHAQRATFYCRHCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaagtagaaaccagccgtcggggtattgagccccatctggttggc
gccactatactgcacgcccatatccgcaacgggcgcctgcgctggccggtttcagacgaa
atttatcgtctgagcgatacgcctgtccttagcgttcagcgccgtgctaaatacctgctg
ctggagttgcctgacggctggataatcattcatctgggaatgtcgggaagcttgcgaata
ttgtcggaatcgttgccggcggaaaaacatgaccatgtcgatctggtgatgagcaacggc
aaaatcctgcgctataccgatcctcgccgctttggcgcctggctttggaccaaagaactg
gaagggcataacgtgctggcgcacctggggccagagccactaagcgaggcgtttaatggc
gaatatttgcagcagaaatgcgcgaagaagaaaacagcgattaaaccctggctaatggat
aacaagctggtggttggtgtaggcaatatctatgccagtgagtcattgtttgccgctggc
atacatcctgaccgcttagcgtcgtcactctctacagaggagtgcgacttgctggcgcgg
gtgataaaagctgttttgctacgcgctatcgaacaaggcggcacaacgttgaaagatttt
ttgcaaagcgatggaaaaccgggctattttgcgcaggagttacaggtgtacggtcgcaaa
ggcgagccgtgtcgggtatgcggtacgccgatagtcgcaacgaaacatgcacagcgtgcg
accttctattgccgtcactgtcagaagtaa
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