Salmonella bongori N268-08: A464_4005
Help
Entry
A464_4005 CDS
T02733
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sbz
Salmonella bongori N268-08
Pathway
sbz03420
Nucleotide excision repair
sbz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A464_4005
03430 Mismatch repair
A464_4005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbz03400
]
A464_4005
Enzymes [BR:
sbz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A464_4005
DNA repair and recombination proteins [BR:
sbz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A464_4005
MMR (mismatch excision repair)
Other MMR factors
A464_4005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGR61189
UniProt:
S5N2R7
LinkDB
All DBs
Position
3998255..4000417
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAAPRSNMLVLAGAGSGKTRVLVHRIAWLLSVENNSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQM
RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWVRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAQTIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGVDGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELVDALAQETADMPLHVQ
TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRLG
TPLAENDTGYKLGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYAKLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaatgataaacagcgcgaagcggtggccgcg
ccacgtagcaacatgctggtgctggcgggcgcgggaagcgggaaaacccgtgtactggtg
caccgcatcgcctggctactgagcgtagaaaacaattcgccgtattccatcatggcggtg
acctttaccaacaaagcagcggcggaaatgcgtcatcgtattggccagttgatgggcacc
agccaaggggggatgtgggtagggacgttccacggtctggcgcaccgtctgctgcgcgcg
catcatatggacgctaatctgccgcaggatttccagattctcgacagtgaagatcagatg
cgtctgcttaaacgtctgattaaggcgatgaatcttgatgagaagcagtggccgccgcgt
caggcgatgtggtacatcaacagtcagaaagacgaaggactacgcccgcaccatatccaa
agctacggcaatccggtggagcagacctggcagaaggtgtatcaggcctatcaggaagcg
tgcgatcgcgctggcctggtggatttcgctgagctactgctgcgcgctcatgaactatgg
ctgaacaagccgcatatcctgcagcactatcgcgagcggtttactaatatcctggtggac
gaattccaggataccaacaacattcagtacgcctgggttcgtctgctggcgggcgatacc
ggtaaagtgatgattgtcggcgacgatgaccagtcaatctacggctggcgtggagcgcag
gtagaaaatattcagcgcttcctcaatgattttcccggcgcgcagactatccgtctggaa
cagaactaccgttcgaccagcaacattcttagcgcggcgaacgctctgattgagaataac
aacgggcgcctgggtaaaaagctgtggaccgatggcgttgacggcgagccgatttcgctc
tattgcgcctttaacgaactggatgaagcgcgctttgtggttaaccgcatcaaaacctgg
caggacaacggcggcgcgcttgcgcaatgcgccatcctttatcgtagcaacgcccagtcg
cgcgtactggaagaggcgttgttgcaggccagtatgccgtaccgtatttatggcggtatg
cgcttcttcgagcgccaggaaattaaagatgcactctcttatctgcgtttgattgccaac
cgcaacgacgatgcggcgtttgaaagggtggtgaataccccgacgcgtggtatcggcgat
cgtacgcttgatgtggtgcgtcagacctcgcgtgaccgccagctaacgttgtggcaggct
tgccgcgaactgctacaggagaaggcgctggctggacgtgcagccagcgcgctacaacgc
tttatggagcttgtcgacgccctggcgcaagagactgctgacatgccgctgcatgtgcag
accgaccgggtgatcaaagactctggcctgcgtaccatgtacgagcaagagaaaggtgaa
aaaggccagacccgtatcgaaaacttagaggagctggtgacagcaacgcgccagtttagc
tacaacgaagaagatgaagacctgatgccgttacaggcgtttctttcccatgcggcgctg
gaggcgggtgaaggacaggcggatacctggcaggatgcggtgcagctcatgacattgcat
tcggcaaaaggactggagtttccgcaggtctttatcgttgggatggaagaggggatgttt
cccagccagatgtcgctggatgaagggggacgtctggaagaggagcgtcgcctggcctac
gtcggcgttacgcgcgccatgcagaagctgaccttaacctatgccgaaacccgtcgtctg
tacggcaaagaggtttaccatcgcccgtcgcgctttatcggcgagctgccggaggagtgt
gtggaagaggtgcgtttgcgcgccactgtcagccgcccggtgagccatcagcgactggga
acgccgctggcggaaaacgatacggggtataagcttgggcagcgggtgcgtcacgcgaag
ttcggcgaagggactattgttaacctggagggcagcggtgagcacagtcgtctgcaggtc
gccttccaggggcagggcatcaaatggttagtggccgcgtatgcgaaactggaaacggtc
tga
DBGET
integrated database retrieval system
