Salmonella bongori N268-08: A464_4340
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Entry
A464_4340 CDS
T02733
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sbz
Salmonella bongori N268-08
Pathway
sbz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A464_4340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbz03019
]
A464_4340
03110 Chaperones and folding catalysts [BR:
sbz03110
]
A464_4340
03029 Mitochondrial biogenesis [BR:
sbz03029
]
A464_4340
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbz04147
]
A464_4340
Enzymes [BR:
sbz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
A464_4340
Messenger RNA biogenesis [BR:
sbz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
A464_4340
Chaperones and folding catalysts [BR:
sbz03110
]
Heat shock proteins
HSP60 / Chaperonin
A464_4340
Mitochondrial biogenesis [BR:
sbz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
A464_4340
Exosome [BR:
sbz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
A464_4340
Exosomal proteins of other body fluids (saliva and urine)
A464_4340
Exosomal proteins of breast cancer cells
A464_4340
Exosomal proteins of colorectal cancer cells
A464_4340
Exosomal proteins of bladder cancer cells
A464_4340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AGR61522
UniProt:
S5NMQ0
LinkDB
All DBs
Position
4396527..4398173
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPNITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI
DKAVAAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTAGTV
ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RVASKLSELRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNA
ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKSDAPDLGAAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaacgacgctcgtgtgaaaatgctgcgcggcgta
aacgtactggcagacgcagtgaaagtgaccctcggcccgaaaggccgcaatgtggttctg
gataaatctttcggtgcgccgaacatcactaaagatggcgtttccgtagcgcgtgaaatc
gagctggaagataagtttgaaaatatgggcgcgcagatggtgaaagaagttgcctctaaa
gcgaacgacgctgcaggcgacggtaccactaccgcgaccgtactggctcagtccatcatc
accgaaggcctgaaagccgttgctgcgggcatgaacccgatggatctgaaacgtggtatc
gataaagcggttgctgcggctgttgaagagctgaaagcgctgtccgtaccgtgctccgac
tctaaagcgattgctcaggtgggtactatctccgccaactccgacgaaaccgtaggtaaa
ctgatcgccgaagcgatggataaagtcggtaaagaaggcgtgatcactgttgaagacggt
accggtctgcaggacgaactggacgtggttgaaggtatgcagtttgaccgcggctacctg
tctccttacttcatcaacaagccggaaactggcgccgtagaactggaaagcccgttcatc
ctgctggctgataagaaaatctccaacatccgcgaaatgctgccagttctggaagctgtc
gcgaaagcaggtaaaccgctgctgatcatcgctgaagacgttgaaggcgaagcgctggcg
accctggtagtgaacaccatgcgcggcatcgtgaaagtggctgcggtgaaagcgcctggc
ttcggcgatcgtcgtaaagccatgctgcaggatatcgctaccctgactgcgggtaccgtt
atttctgaagagatcggtatggagctggaaaaagctaccctggaagatctgggtcaggca
aaacgcgttgtgatcaacaaagacaccaccaccatcattgatggcgtgggtgaagaagcg
gcaatccagggccgtgtagctcagattcgtcagcagatcgaagaagcgacctccgactac
gaccgtgaaaaactgcaggagcgcgtagcgaaactggcaggcggtgttgcagttattaaa
gttggtgcggctaccgaagttgagatgaaagagaagaaagcacgcgttgaagatgccctg
cacgcgacccgtgctgcggtagaagaaggcgtggttgctggcggtggtgttgcgctgatt
cgcgtggcgtccaaactgagcgagctgcgtggtcagaacgaagatcagaacgtgggtatc
aaagttgcgctgcgcgcaatggaagctccgctgcgtcagatcgtactgaactgcggcgaa
gagccgtctgttgtcgctaacaccgttaaaggcggcgacggtaactacggttacaacgca
gcaactgaagaatacggcaacatgatcgatatgggtatcctggacccaaccaaagttacc
cgttctgcgctgcagtacgcggcttctgtggctggtctgatgatcactactgagtgcatg
gtgaccgacctgccgaaaagcgatgcgcctgacttaggtgctgctggcggtatgggcggt
atgggtggtatgggcggcatgatgtaa
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