Salmonella bongori N268-08: A464_784
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Entry
A464_784 CDS
T02733
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
sbz
Salmonella bongori N268-08
Pathway
sbz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A464_784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbz03019
]
A464_784
Enzymes [BR:
sbz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A464_784
Messenger RNA biogenesis [BR:
sbz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A464_784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AGR57970
UniProt:
S5N650
LinkDB
All DBs
Position
800107..801462
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AA seq
451 aa
AA seq
DB search
MSFDSLGLHPDILRAIAGQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFSLPLL
QHLITQQPHAKGRRPVRALILTPTRELAAQIGENIRDYSQYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLAKLPPK
RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGHGQGGAGRSQQPRRQDGGAP
KAKAKPRTGEGKSAGDKARPPRRPRRITPAQ
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattccctgggtttacatcctgatattttgcgcgccatcgccgggcagggt
taccgtgaaccgacccccattcagcagcaggcgattcccgccgtgctggaaggccgcgac
ctgatggccagcgcgcagaccggcaccggtaaaaccgctggtttttcactgccgttatta
cagcatctgattactcaacaaccacatgcgaagggacgtcgtccggtgcgggcgctgatc
ctcactccgactcgcgaactggcggcgcagattggcgaaaacatccgcgattacagtcag
tatctcaacattcgctcgctggtcgttttcggcggcgtgagcatcaatccgcagatgatg
aaactgcgtggtggggtcgatgtgctggtggcaacgccggggcgcctgctcgatctggaa
catcagaatgctgtgaagctggatcaggtagaaattctggtgctggacgaggccgaccgg
atgctggatatgggctttatccacgatattcgccgcgtgctggcaaaactgccgccgaag
cgtcagaacctgctattttctgcgaccttctctgacgatattaaagcgcttgccgaaaag
ctgctgcataacccgctggaaattgaagtggcgcgccgtaataccgcctctgagcaggtc
acacagcatgtccattttgtcgataaaaaacgcaaacgcgaactgctgtcacaaatgata
ggtcagggtaactggcaacaggtgctggtcttcacccgcaccaagcatggcgcgaaccat
ctggcggaacagctaaataaagacggtattcgcagcgcggcgatccacggtaataaatcg
cagggcgcacgtactcgcgcactggccgattttaaatccggcgatattcgcgtgctggtg
gcgaccgacattgctgcgcgtggcctcgatatcgaagagttaccgcacgtggtcaactat
gagttaccaaatgtgccggaagattacgtacaccggattggccgtaccggtcgcgcggcg
gcaaccggcgaagcgctgtcgctggtctgtgttgacgagcacaagctgttacgtgatatt
gaaaagctgctgaaaaaagagatcccacgtatcgctattccgggttatgaacccgatccg
tcaatcaaagcggagccaattcagaacggtcgccagcagcgtggcggcggtggtcgcggc
cacgggcagggcggcgcaggccgtagccagcagccgcgtcgtcaggacggcggcgcgccg
aaggcgaaagccaaaccgcgtactggcgaggggaaatctgctggcgacaaagcccgtccg
ccgcgccgtccgcgtagaattacccccgcacaataa
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