Staphylococcus carnosus subsp. carnosus: SCA_0003
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Entry
SCA_0003 CDS
T00863
Symbol
trmE
Name
(GenBank) putative tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
sca
Staphylococcus carnosus subsp. carnosus
Brite
KEGG Orthology (KO) [BR:
sca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sca03016
]
SCA_0003 (trmE)
Transfer RNA biogenesis [BR:
sca03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SCA_0003 (trmE)
Prokaryotic type
Methyltransferases
SCA_0003 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
Ras
GTP_EFTU
Roc
cobW
MMR_HSR1_Xtn
MeaB
Motif
Other DBs
NCBI-ProteinID:
CAL26918
UniProt:
B9DI95
LinkDB
All DBs
Position
853..2235
Genome browser
AA seq
460 aa
AA seq
DB search
MMDLDTITSISTPMGEGAIGIVRLSGKEAVEITDKLYKGKKPLAEVESHTINYGHIVDPE
TNEVVEEVMVSVLRAPKTFTREDIVEINCHGGILTINHVLELTMSYGARLAEPGEYTKRA
FLNGRIDLSQAEAVMDFIRSKTDRASKVAMNQIEGRLSDMIKRQRQSILEILAQVEVNID
YPEYDDVEDATTEFLLKQSKEIKEDIDKLLATGTQGKIMREGLSTVIVGKPNVGKSSMLN
NLIQDNKAIVTEVAGTTRDVLEEYVNVRGVPLRLVDTAGIRETEDIVEKIGVERSRKALS
EADLILFVLNYNEGLTEEDRKLYEVIKNEDAIIIVNKTDLEQHLDLDEVKAMVGDMPVIE
TSMLKQEGIDQLEEQIRDLFFGGEVQNQDMTYVSNSRHISLLKQARNAIQDAIDAAEAGV
PMDMVQIDLTRTWQILGEIIGESASDELIDQLFSQFCLGK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgatggatttagatacgattacaagtatctccactccaatgggtgagggtgcaatcggt
attgtcagattatctggtaaagaagctgttgaaataacggataagttatataaaggaaag
aaaccattagccgaggtagaatcacatacaattaattatggacatatcgttgatcctgaa
accaatgaagtggttgaagaagttatggtatctgtgctgcgggcaccaaaaacatttaca
agagaagatatcgttgagattaattgccatggcggtattttaacgattaatcatgttctt
gaattgacaatgtcatatggcgcaagattagctgaacctggtgaatacacaaaacgtgct
ttcttaaatggcagaattgatttatcgcaagcagaagcagtaatggactttatccgttct
aagacagaccgagcgtctaaagttgcaatgaatcaaattgaaggccgtttgagtgatatg
attaaacgccagcgtcaatctattttagaaatcttagcgcaagttgaagtgaacatcgat
tatccagaatatgatgatgttgaagatgcgacaacagagttcttattaaagcagtctaaa
gaaattaaagaagatattgataagcttttagcaacaggaactcaaggcaagattatgcga
gaagggttgtctacagttattgtaggtaagccgaatgttggtaagtcttcgatgcttaat
aacttaattcaagataataaggcgattgttacagaagtagccggcacaacaagagatgtc
ttagaagaatatgttaatgtacgcggtgtgcctttacgtttagtagatactgcaggcatt
cgcgaaactgaagatatcgtagaaaaaatcggtgtagaacgttcaagaaaagcgttaagc
gaagcagatttgatcttatttgtacttaattataatgaaggccttacagaagaagaccgt
aaattatatgaagtcattaaaaatgaagatgcgattatcattgtgaataaaactgacctt
gaacaacatttagacttagatgaagtgaaagcgatggtcggagatatgccagtgattgaa
acttcaatgttgaaacaagaaggtattgatcaattagaagaacaaattcgcgacttattc
tttggcggagaagtgcaaaaccaagatatgacatatgtttctaattcaagacacatttct
ttattaaaacaagcgcgtaacgcgattcaagatgcaatagatgctgcagaagcgggtgta
ccgatggatatggtacaaattgacttaacaagaacttggcaaatattaggagaaattatc
ggagaaagtgcaagcgacgaattgattgatcaattattcagtcagttctgtctcggaaaa
taa
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