Staphylococcus carnosus subsp. carnosus: SCA_0408
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Entry
SCA_0408 CDS
T00863
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
sca
Staphylococcus carnosus subsp. carnosus
Pathway
sca03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SCA_0408 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sca03400
]
SCA_0408 (uvrA)
DNA repair and recombination proteins [BR:
sca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCA_0408 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SCA_0408 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_23
RsgA_GTPase
AAA_16
AAA_21
nSTAND3
AAA_33
AAA_22
DnaJ_CXXCXGXG
ATPase_2
NTPase_P4
AAA_24
Viral_helicase1
cobW
SLFN-g3_helicase
YwpF
Motif
Other DBs
NCBI-ProteinID:
CAL27322
UniProt:
B9DJM9
LinkDB
All DBs
Position
419171..422014
Genome browser
AA seq
947 aa
AA seq
DB search
MKEPSIVVKGARAHNLKNVDVELPKNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYIRLLYTRVGKA
YCPEHGIQIESQTVQQMVDRTLELEERTKIQLMAPVVNHRKGSHEKLLEDISKKGYVRVR
VDGEILDINDVPDLDKNKNHTIEVVVDRLVVKDGIEGRLADSMETALELAEGNLTVDVIG
GDEMKFSENHACPICGFSIGELEPRMFSFNSPFGACPDCDGLGQKLTADIDLIVPDQDKT
LEEGAIVPWEPKSSDFYPTLLKRVCEVYKIKMDKPFKKLTDRQKDIILYGSKDKEIKFTF
ESRNGQKRTRTMPFEGVIPNIERRFHESPSEYVREVMRKYMTELPCETCHGKRLSKEALS
VYVSGLNIGEVVEYSIKEALDFFENIDLSEQDRKIADLILKEIISRLYFLNNVGLDYLTL
NRSSGTLSGGEAQRIRLATQIGSRLSGVLYVLDEPSIGLHQRDNDRLIETLKEMRDLGNT
LIVVEHDDDTMREADYLVDVGPGAGEHGGEIVASGTPKQVMRNKKSLTGQYLSGKKRIEV
PEYRRPATDRRLKVRGAKSNNLKDVDVDFPLSTMTVVTGVSGSGKSSLVNEVLYKTLAQK
INHSKVRPGKVDEIEGIDQLDKVIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAQTNEAK
IRGYQKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCGGKRYNRETLEVTYKG
KNIADVLDMTAEEATHFFENIPKIKRKLQTLVDVGLGYVKLGQPATTLSGGEAQRVKLAS
ELHKRSTGRSIYILDEPTTGLHVDDISRLLKVLDRIVENGDTVVIIEHNLDVIKTADYII
DLGPEGGDGGGTIVATGTPEEIAEAPDSYTGKYLKKVLERDKAVETK
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaccatccatagttgtaaaaggtgccagagcgcacaacttaaaaaatgtagat
gtagaattaccgaagaataaattaattgtgatgacaggcttatcaggttctggtaagtct
tccttagcgttcgatacaatctatgctgaaggacaacgccgttatgttgaatctttaagt
gcctatgcacgccaatttttagggcaaatggataaaccagatgttgacacaattgaggga
ttgtcacctgcgatttcaattgatcaaaaaacaacaagcaaaaatccgcgctctacagtt
gctactgtaacggaaatatatgattatattcgtttgttatatacgcgtgtaggtaaagca
tattgtcctgaacacggtattcaaattgagtcgcaaacggtacagcaaatggtagaccgt
actttagaattggaagaaagaactaaaattcaattaatggcacctgttgtcaatcatcgt
aaagggtcacatgaaaaattattagaagatattagtaaaaaaggttatgttcgtgtacgt
gttgatggagaaattttagacattaatgatgtaccggatttagataaaaataaaaatcat
acaatagaagtggttgtagaccgtttagttgtcaaagatggtatagaaggcagacttgct
gactctatggaaacagctttggaattagcagaaggcaatttaactgttgatgttatcggc
ggagatgaaatgaagttctctgaaaatcatgcctgtccgatttgcggtttcagtattggt
gaattagaaccgcgtatgttcagttttaacagcccattcggcgcatgtcctgattgtgat
ggactaggccaaaagttaactgcagatattgatttaattgtacctgatcaagataaaaca
cttgaagaaggtgctattgttccatgggaaccaaagagttcagatttttatccgactctt
ttaaaacgtgtttgtgaagtttataaaattaaaatggataaacctttcaagaaattaact
gatcgacaaaaagatattattttatatggttctaaagataaagaaatcaaattcactttt
gaatctcgtaatggacaaaaacggacacgcacaatgccgtttgaaggtgtcattccaaat
atcgaaagacgtttccatgaatcgccatcggaatatgttcgtgaagtgatgcgtaaatat
atgacagaacttccttgtgaaacatgtcatggtaaacgtttgagcaaagaagcgttatca
gtttatgtatcaggtcttaatatcggtgaagtggttgagtattcaattaaagaagctttg
gatttctttgaaaatattgatttatcagagcaagatcgcaaaattgcagatttaatttta
aaagaaattatttcaagactatactttttaaataatgttggcttggattatctgacatta
aaccgttcatcaggaactttatccggcggagaagcacaacgtattcgtctagcgactcaa
attggttcgagattatcaggtgtcctctatgtattggatgaaccttcaattggacttcat
cagcgagataatgaccgcttaattgaaacgttgaaagaaatgcgtgatttaggaaataca
ttgattgtagtagaacatgatgatgacacaatgagagaagcggattacttggttgatgtg
ggtccgggagctggtgagcatggtggagaaatcgtagcaagcggtacaccaaaacaagtc
atgcgtaataagaaatcattaaccggtcaatacttgagcggtaaaaaacgtatcgaagta
ccagaatatagacgcccagcaactgaccgcagattgaaagtcagaggggctaaaagcaac
aacttgaaagatgtagatgtagatttcccattatctacaatgactgtagttacaggtgtt
tcaggttcaggtaaaagttcattagtgaacgaagtgttatataaaacacttgcgcaaaaa
atcaatcattcaaaagtaagacctggtaaagtagatgaaattgaaggtattgatcaatta
gacaaagtcattgatattgaccaatctccaatcggcagaacaccgcgttcaaacccagca
acttatacaggcgtatttgatgacattcgtgatgtgtttgcacaaacaaatgaagcaaaa
atccgcggttatcaaaaaggacgttttagttttaatgtgaaaggcggacgttgtgaagct
tgtaaaggtgacgggattatcaaaatagaaatgcactttttaccagatgtttatgtacct
tgtgaagtatgtggcggcaaacgttataatcgtgaaactttagaagtgacatataaaggt
aaaaacattgcagacgtattagatatgactgctgaagaagctacgcatttctttgaaaac
attcctaaaatcaaacgtaaattacaaacattagttgatgtaggtttaggttatgtgaaa
ttaggacaacctgcaacgacattatctggcggagaagcacaacgtgtgaaattagcatct
gaattgcataaacgttcaactggccgttcaatttatatcctggacgaaccgacaacaggt
ttgcatgtggatgatatcagccgattattaaaagtgttggatcgaattgtagaaaacgga
gatacagtagtcattattgaacataatttagatgttattaaaacagctgattatattatt
gatttaggacctgaaggcggcgatggcggaggtactattgttgcgacaggaacacctgaa
gaaattgctgaagcaccagattcttatactggtaaataccttaaaaaagtattagaacgt
gataaagcagttgaaacaaaataa
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