Staphylococcus carnosus subsp. carnosus: SCA_0911
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Entry
SCA_0911 CDS
T00863
Symbol
truB
Name
(GenBank) putative tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sca
Staphylococcus carnosus subsp. carnosus
Brite
KEGG Orthology (KO) [BR:
sca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sca03016
]
SCA_0911 (truB)
Enzymes [BR:
sca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SCA_0911 (truB)
Transfer RNA biogenesis [BR:
sca03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SCA_0911 (truB)
Prokaryotic type
SCA_0911 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CAL27820
UniProt:
B9DPD7
LinkDB
All DBs
Position
915858..916772
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AA seq
304 aa
AA seq
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MEGILPVFKERGLTSHDVVFKLRKILHTKKVGHTGTLDPEVDGVLPVCIGNATKVSDYIM
DMGKAYEAEVTIGYSTTTEDQTGEVLERRNVEPDQLSTQEIDAAIQSFKGEIEQIPPMYS
SVKVNGRKLYEYARNNETVERPKRKVMIYEIERTSEPEFHDGVCSFNILIRCGKGTYIRT
LATDIGNVLNYPAHMSLLTRIESGGFQIKDTLKLDEVDHLFKQESLQEHLFPIEYGLKGL
PHIRISNPEMKKRILNGQKFYKNDFTEAIEGVTVLVDSDTEKALALYIPHSEKPNEIKPK
KVFN
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggagggtattttacctgtttttaaagagcgtggacttacaagccacgatgtagtcttt
aaactacgtaaaatcttacatactaaaaaagtaggccatacagggacattggatccagaa
gtagatggtgtattacctgtatgtatcgggaatgctactaaagtaagtgattatattatg
gatatgggaaaagcctatgaggctgaggtcacgattggttacagtacaacaactgaagat
caaactggtgaagtattagaaagacgtaatgtagaaccagatcaattatcaacacaagaa
atagatgcagcaattcaatcatttaaaggtgaaattgaacagattccgcctatgtattca
tcagtaaaagtaaatggacgaaaattatatgaatatgcacgtaataacgagacggttgaa
agaccgaaacgaaaagtgatgatttatgaaattgagcgaacatcagagcctgaattccac
gatggtgtttgcagttttaacatcttgattcgatgtggcaaaggtacctatattcgtaca
ctagctacagatattggaaatgttttaaattatccagcacatatgtctttacttactcga
atagagagcggcggtttccaaattaaagatactttgaaattagatgaggttgatcatctt
tttaagcaagaatcattacaggaacacttatttcctatagaatatggattgaagggatta
cctcatattcgtattagtaatccagagatgaaaaaacgtattttaaatgggcagaagttt
tataaaaatgattttacagaagcgattgaaggtgtgacggtattagttgatagtgataca
gaaaaagcattagcactttatataccgcattctgaaaaaccaaatgaaatcaagccgaag
aaagtttttaattaa
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