Staphylococcus carnosus subsp. carnosus: SCA_0988
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Entry
SCA_0988 CDS
T00863
Name
(GenBank) putative ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sca
Staphylococcus carnosus subsp. carnosus
Brite
KEGG Orthology (KO) [BR:
sca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sca03400
]
SCA_0988
DNA repair and recombination proteins [BR:
sca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SCA_0988
Archaeal homologous recombinant proteins
SCA_0988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
COG6_N
AAA_21
Sterile
ABC_tran
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
CAL27896
UniProt:
B9DP77
LinkDB
All DBs
Position
993868..996903
Genome browser
AA seq
1011 aa
AA seq
DB search
MKPLNLHLQNVGPFMEETIDFTQLKNNELFLISGKTGSGKSMLFDAIVFALYGKASTSSR
KETALRSHFADGKSPMEVELVFQLKDKQFKVVRQGAFIKEGNKNPTNPNLSVYELEDGKY
ELRESKVTAGNNYIEGLLGVDIEQFRQLFILPQGEFKKFLFSKSSAKQEILRTLFNTNRF
ETLQQMLVNQNKEEKKKIEARHQQIEQLWNKAEDFDDESLQAYKTLPSIQTEKLLDAIPD
FERIGKDIYKHLEKEKTQQEEVKHKAETAYRDAEDLNQKINDRKTLTDELEALEKHASEI
KILETKLKKIREVRPLHQIIENISAHSKKLDELNVKCEKIEHNIQQYQASLQKITDEQAA
LSEAEDDIEAKRKFINETQYFYQNIKQYQIAYDSKNQVHEDYNQSKKDLNDNEQLLDEMK
AVHQNERPDYERLHQLTQQLFDLKQEIKDTKEAIEKKEEYDQRVKKLKALEQEMTQNMRK
SNEIQEAISQFNTNQLEFDNQEAMIKKLQSMLQPGDQCPICGNTIDSPSDHLDFEQLKAQ
KEKLNDLNENKEAIRAAYSKLEAEYSMLKNETDKFEHQEVPENNEQILADLKEKYEKTEA
DKKHQEKRNKEIEKKQTQIQEIKEKIQNLQLALTQKKAESEKINRLIEAFENGTTFNKIN
DFIKGFSEKEEAVKAHQTKIEALKQQETEAKQNIAVEQTKFKSAQDNRKETQKEKTNLEQ
QSQSEMQNIGIQSTDEVQEILDLMPEKEQIEERIKSYHEKQNNLSHKIAELKALIGNQEK
PDLEKLFKNLELQKTELEEKSKRLNEHEFKMQLNTSNFKEIKEHIDVLEKELSEQQEIFD
LAEVLSGKNIQKLTLENYVLVYYLEMILEFANKRFMKMTNNRYILKRSDVVTQGYSGLEI
VVFDSHSNKTRHISTLSGGESFQASLALALGLSEVVQQESGGITLESMFIDEGFGTLDQE
TLETALDTLLNIKSTGRMVGIISHVSELKQRIPTILEVKTDAYQSTTQFKF
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccattaaaccttcatttgcaaaatgtcggtcctttcatggaagaaacaatagat
tttacacaactgaaaaataatgaactttttctaatcagtggtaaaacaggttcaggaaag
tcaatgctgtttgatgcgattgtgtttgctttgtatggaaaagcatcaacgtcttcaaga
aaagaaactgcattaagaagtcactttgctgatggaaaatctcctatggaggtagaactt
gtatttcaattgaaagataagcagtttaaagttgttagacaaggtgcctttatcaaagaa
ggcaataaaaacccaacaaatcctaatttatccgtttatgagctagaagatggaaaatat
gaacttagagaaagcaaagtcactgcggggaataattatatagaaggcttgttaggtgtt
gatatagagcaatttagacagctgtttattctgccgcaaggagaatttaaaaagttcctc
ttttctaagagttcagcaaaacaagaaattcttagaacattattcaacacgaaccgtttt
gaaactttacagcaaatgttagtgaatcaaaataaagaagaaaagaaaaaaattgaagca
agacaccagcaaatcgaacagttgtggaataaagcagaggattttgatgatgaaagctta
caagcgtataaaacacttccgagcatacaaactgaaaaattattagatgcgattccagat
tttgaacgaattggtaaagatatttataaacacttagaaaaagaaaaaacgcaacaagag
gaagttaagcataaagctgaaacagcttatcgagatgctgaagatttaaatcaaaaaata
aatgaccgaaagactttaacagatgaattagaagcacttgaaaaacatgcttctgaaatt
aaaatactggaaacaaagttgaaaaaaatccgagaagtacgcccgcttcatcaaatcatt
gaaaatatttcagcgcattcaaaaaaattggacgaattaaatgttaagtgtgagaaaatc
gagcataatattcaacaatatcaagctagtctgcagaaaatcacagatgaacaagcagca
ctctctgaagcagaagatgacatagaagcaaaacgtaaatttattaacgaaacacagtat
ttttatcaaaatatcaaacaatatcaaatagcatatgactctaaaaaccaagttcatgaa
gattataaccaatccaaaaaagatttaaatgataatgaacaattattagatgaaatgaaa
gctgttcatcaaaatgagcgacctgattatgaacgacttcatcaacttacacagcaattg
tttgatttaaaacaagaaatcaaagatacaaaagaagcgatagaaaaaaaggaagaatat
gatcaacgtgtaaaaaaattaaaagctttagaacaagaaatgacacaaaatatgcggaaa
tcaaatgaaattcaagaagcaatttctcagtttaatacgaatcaattggaatttgacaac
caagaagcaatgattaaaaaacttcaatcaatgttgcaaccaggagaccaatgcccgata
tgcggcaatacgattgattcaccttcagatcatttggactttgaacaattaaaagcacaa
aaagaaaagttgaatgatttaaacgagaacaaagaagcaataagagccgcatattctaaa
ttagaagctgagtacagtatgcttaaaaatgaaactgataaatttgagcatcaagaagtg
ccggaaaataatgaacaaatactcgcagatttaaaagaaaagtacgaaaaaacagaggca
gacaaaaaacatcaagagaaacgcaacaaagaaattgagaaaaaacaaactcaaatacaa
gagattaaagaaaaaattcaaaatttacaacttgcactcactcagaaaaaagctgaatct
gaaaaaataaatcgtttgattgaagcgttcgaaaatggaacaacgtttaataagattaat
gattttataaaaggtttttcagaaaaagaagaagcagttaaagcgcatcaaactaaaatt
gaggcactgaaacaacaagaaacagaggcaaagcaaaatatagcagttgagcaaacaaag
ttcaaatcagcacaagataaccgtaaagaaacacaaaaagaaaaaacaaatttagagcaa
caatcacaaagtgaaatgcaaaacatcggtatccaaagtacagatgaagtacaagagatt
ttagatttgatgccagaaaaagaacaaattgaagaacgaatcaaatcatatcatgagaaa
caaaataatttatctcataagattgctgaattgaaagcacttatcggtaatcaagagaaa
cctgacttagagaagttatttaaaaatcttgaattacagaaaacagaattagaagagaag
tcgaagcggttaaatgagcatgagtttaaaatgcaattaaatacgagtaattttaaagaa
ataaaagaacacattgatgttttagaaaaagaattatctgaacaacaagaaatttttgat
ttagctgaagtattatctggcaagaatatacaaaagctgacattagaaaattatgtgtta
gtttactatttagaaatgattttagagtttgctaataagcggtttatgaaaatgaccaat
aatagatatatattaaaacggagtgatgttgtgacacaaggttatagtggattagaaatt
gttgtgtttgattcacattccaataaaacacgtcatatttctacactatcaggtggagaa
tcattccaagcatcattggcattagcattaggattaagtgaagtcgtccaacaagagtca
ggcggcattactttagaatcgatgttcatagatgaaggatttggaacacttgatcaagaa
actttggaaacagctttagatacattattaaatattaaatcaacaggcagaatggtaggt
attatttctcatgtcagtgaacttaaacaacgtattcctacgattttagaagtaaaaaca
gatgcttaccaaagtacgacacaatttaagttttaa
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