Staphylococcus carnosus subsp. carnosus: SCA_1179
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Entry
SCA_1179 CDS
T00863
Name
(GenBank) putative helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
sca
Staphylococcus carnosus subsp. carnosus
Brite
KEGG Orthology (KO) [BR:
sca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sca03019
]
SCA_1179
03009 Ribosome biogenesis [BR:
sca03009
]
SCA_1179
Enzymes [BR:
sca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SCA_1179
Messenger RNA biogenesis [BR:
sca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SCA_1179
Ribosome biogenesis [BR:
sca03009
]
Prokaryotic type
rRNA helicases
SCA_1179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Peptidase_M20
Motif
Other DBs
NCBI-ProteinID:
CAL28087
UniProt:
B9DNM9
LinkDB
All DBs
Position
complement(1192537..1193877)
Genome browser
AA seq
446 aa
AA seq
DB search
MAKQHPFEQFGLDPKLIDAVSDLNFNQPTEIQQRVIPKILKGTSIIGQSQTGTGKSHAFL
LPLIERIDPSIQEPQAIVVAPTRELAQQLYKAAQHLTEFKKDVKVSLFIGGTDFERDKQR
CNVQPQLVIGTPTRINDLSKDGTLHAHLANYLVVDEADLMIDLGLIEDVDHIAARLEDNA
NIAVFSATIPKSLHPFLNKYLNQPELIEVNSKTQNKKNIDFYLIPTKGAAKVDKTKALID
ILNPYLCIIFCNSRESADELAEELIADGLKIGMIHGGLSPRERKQQMKRIRNLDFQFVIA
SDLASRGIDIEGVSHVINFDVPKDIDFFTHRVGRTGRGQYKGEAFTLFTPDEEELVGEIE
DRGYQFKDVDLKNGEIKPIKAHNTRKTRTKKDDHLTTQVKRKIKRGNKKKVKPGYKKKFK
RELEDLKRKERKQYSKRKNREQRKNK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacagcacccatttgaacaatttggattagacccaaaacttattgacgctgta
tcagatcttaacttcaatcagccaacagaaatccaacaaagagttattccaaaaatttta
aaaggtacaagtattatcggtcaatctcaaacaggcacaggtaaatcacatgcattttta
ctgccattaattgaaagaattgatccttcaattcaagaaccacaagctatagttgtagcc
cctacgagagaattagcgcagcaattatataaagcagctcaacatttaactgaatttaaa
aaagatgtaaaagtgtcactatttatcggtggtacagattttgaaagagataaacaacgt
tgtaatgttcaacctcaattagttatcggtacgcccactagaatcaatgacttatcgaaa
gacggaacattacatgctcatttagcaaattatttggttgtggatgaagctgatttgatg
attgatttagggttaattgaagatgttgatcatattgcagctagattagaagataatgcg
aatatagcagtattcagtgcaactattcctaagtcattacatccatttttaaataaatat
ttaaaccaaccagaattaatagaggtaaatagcaaaactcaaaataaaaagaacattgat
ttttatctaatacctacaaaaggcgcagcgaaagttgataaaaccaaagctcttattgat
attttgaatccatacctatgtatcattttctgtaatagcagagagagtgcagacgaatta
gccgaagaactgattgcagatggattgaaaataggaatgattcatggaggattgtctcca
cgtgaacgtaaacaacaaatgaagagaatcagaaatttagatttccaatttgttatagca
agtgatttagcttcaagaggtattgatattgagggagttagtcacgttattaattttgat
gtgcctaaagacatagatttctttacacatcgtgttggtcgtactggtcgtggacaatac
aaaggtgaagcttttacattatttacacctgatgaagaagaattagtcggtgaaattgaa
gatagaggttatcaattcaaagatgtagatctcaaaaatggggaaattaaacctatcaaa
gctcataatactcgtaaaactcgaacaaaaaaagatgatcatttgactacacaagttaaa
cgtaaaatcaaacgtggcaataagaaaaaagttaaaccgggatacaagaaaaagtttaaa
agagaattagaagatttaaaaagaaaagaacgaaaacaatacagcaaaagaaaaaataga
gagcaacgtaaaaataaataa
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