Staphylococcus carnosus subsp. carnosus: SCA_1540
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Entry
SCA_1540 CDS
T00863
Symbol
groEL
Name
(GenBank) GroEL protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sca
Staphylococcus carnosus subsp. carnosus
Pathway
sca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCA_1540 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sca03019
]
SCA_1540 (groEL)
03110 Chaperones and folding catalysts [BR:
sca03110
]
SCA_1540 (groEL)
03029 Mitochondrial biogenesis [BR:
sca03029
]
SCA_1540 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sca04147
]
SCA_1540 (groEL)
Enzymes [BR:
sca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SCA_1540 (groEL)
Messenger RNA biogenesis [BR:
sca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SCA_1540 (groEL)
Chaperones and folding catalysts [BR:
sca03110
]
Heat shock proteins
HSP60 / Chaperonin
SCA_1540 (groEL)
Mitochondrial biogenesis [BR:
sca03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SCA_1540 (groEL)
Exosome [BR:
sca04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SCA_1540 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
SCA_1540 (groEL)
Exosomal proteins of breast cancer cells
SCA_1540 (groEL)
Exosomal proteins of colorectal cancer cells
SCA_1540 (groEL)
Exosomal proteins of bladder cancer cells
SCA_1540 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
CAL28445
UniProt:
B9DMM2
LinkDB
All DBs
Position
complement(1555515..1557137)
Genome browser
AA seq
540 aa
AA seq
DB search
MAKEIKFSEDARQSMLRGVDQLANAVKVTIGPKGRNVVLDKEYGAPLITNDGVTIAKEIE
LEDPYENMGAKLVQEVANKTNEIAGDGTTTATVLAQAMIQEGLKNVTSGANPVGLRKGID
KAVTEAVKSLHEQSQKVENKNEIAQVGAISAADEEIGQYISEAMDKVGNDGVISIEESNG
FNTELEVVEGMQFDRGYQSPYMVTDSEKMEADLERPYILVTDKKISSFQDILPLLEQIVQ
SNRPILIIADEVEGDALTNIVLNRMRGTFTAVAVKAPGFGDRRKSMLEDIAILTGAQFIT
DDLGYDLKDATVDMLGTANKVEVTKDNTTIVNGDGDKNSIDARVTQLKSQIEETNSDFDR
EKLQERLAKLTGGVAVIKVGAASETELKERKLRIEDALNSTRAAVGEGIVAGGGTALVNV
YKQVSEIEAEGDVETGINIVLKALEAPVRQIAENAGLEGSIIVEKLKHAEPGIGYNAATD
EWVNMLDAGIVDPTKVTRSALQNAASVAAMFLTTEAVVAKLPEENNDAGGPAMGGMSGMM
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaaatcaaattttctgaagatgcgcgtcaatctatgcttcgtggagtggat
caacttgcgaatgcagttaaagttacaatcggaccaaaagggcgaaatgttgtattagat
aaagaatatggtgcacccttaattacaaatgatggtgttacgattgcaaaagaaatcgaa
cttgaagatccatacgaaaatatgggtgctaaacttgttcaagaagtagctaataaaaca
aatgagattgctggtgatgggacaactactgcaactgttttagcacaagcaatgattcaa
gaaggcttgaaaaacgtaacaagtggtgctaatccggtcgggttacgtaaaggtatcgat
aaagcggtaactgaagcggttaaatcacttcacgaacaatcccaaaaagtagaaaataaa
aatgaaattgcccaagttggtgccatttcagcagctgatgaagaaattggtcaatatata
tctgaagcaatggataaagtaggtaacgatggtgttatcagtatcgaagaatctaatggt
ttcaatactgaattagaagtagtagaaggtatgcagtttgatcgtggatatcaatctcct
tatatggtaactgattcagaaaaaatggaagcggatttagaacgtccatatattttagtg
actgataaaaaaatcagctcattccaagatattcttccattattagaacaaattgttcaa
tctaatcgtccaatcttaatcatcgcagatgaagtagaaggtgatgcattaactaatatc
gtattaaaccgtatgcgcggcacattcacagctgtcgctgttaaagctcctggattcgga
gatcgccgtaaatcaatgttagaagatattgcaattttaacaggtgcacaattcatcaca
gatgatttaggttatgatttaaaagatgctactgtagatatgttaggtactgcgaataaa
gtagaagttactaaagacaatactacaatcgttaatggtgatggagataaaaattcaatt
gatgcacgtgttacacaattgaaatcacaaattgaagaaacaaattcagatttcgaccgt
gaaaaattacaagaacgcttagctaaattaacaggtggcgttgctgttattaaagttggt
gcagcaagtgaaactgagttaaaagaacgtaaattacgtatcgaagatgcattaaactca
acacgtgcagctgttggagaaggtatagtagctggtggtggtactgctctagtgaatgta
tataaacaagtttcagaaatcgaagcagaaggcgatgttgaaacaggtattaatattgtg
ttgaaagcactagaagctccagttcgtcaaattgctgaaaacgctggcttagaaggttca
atcattgttgaaaaacttaaacatgcagaaccaggtatcggttacaatgcagctactgat
gaatgggtaaatatgttagatgcaggtattgtagatcctactaaagtaacacgttcagca
ttacaaaacgcagcaagcgttgcagcaatgttcttaactacagaagcagtagttgccaaa
ttacctgaagaaaataatgatgcaggcggtccagcaatgggcggaatgtcgggtatgatg
taa
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