Staphylococcus carnosus subsp. carnosus: SCA_1616
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Entry
SCA_1616 CDS
T00863
Symbol
glyA
Name
(GenBank) serine hydroxymethyl transferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sca
Staphylococcus carnosus subsp. carnosus
Pathway
sca00260
Glycine, serine and threonine metabolism
sca00460
Cyanoamino acid metabolism
sca00630
Glyoxylate and dicarboxylate metabolism
sca00670
One carbon pool by folate
sca00680
Methane metabolism
sca01100
Metabolic pathways
sca01110
Biosynthesis of secondary metabolites
sca01120
Microbial metabolism in diverse environments
sca01200
Carbon metabolism
sca01230
Biosynthesis of amino acids
sca01240
Biosynthesis of cofactors
sca04981
Folate transport and metabolism
Module
sca_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SCA_1616 (glyA)
09102 Energy metabolism
00680 Methane metabolism
SCA_1616 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SCA_1616 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SCA_1616 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SCA_1616 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SCA_1616 (glyA)
Enzymes [BR:
sca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SCA_1616 (glyA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Cys_Met_Meta_PP
Poly_A_pol_cat
OKR_DC_1
SelA
Motif
Other DBs
NCBI-ProteinID:
CAL28522
UniProt:
B9DMF3
LinkDB
All DBs
Position
complement(1633447..1634685)
Genome browser
AA seq
412 aa
AA seq
DB search
MSFIEKEDKAVFEAIQNEYNRQNNNIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRY
YGGCQYVDITETLAIERAKELFGAEHVNVQPHSGSQANMAVYLVALDHGDTVLGMNLSHG
GHLTHGSPVNFSGKFYNFVEYGVDKETERIDYEEVRRLAKENKPKLIVAGASAYPREIDF
KKFKEIADEVGAKLMVDMAHIAGLVAAGLHQNPVDYADFVTTTTHKTLRGPRGGMILTKE
EYAKQIDKTIFPGIQGGPLEHVIAAKAVAFGEALNPDFKDYQEQVVKNAKALADTLIEEG
FRVVSGGTDNHLVAVDVKGSFGITGKEAEEALDEVGITCNKNTIPFDQEKPFVTSGLRLG
TPAATTRGFEEADFEEVAKIISLVVQNPKDEAKLKEASDRVAALTSKHPLYK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttatcgaaaaggaagacaaagcagtatttgaagctattcaaaatgaatacaac
cgccagaacaacaacattgaattaatcgcatctgaaaactttgtatctgaagcagttatg
gaggcacaaggttcggtattaacgaataagtacgctgaaggatatccaggtcgtcgttac
tacggtggctgccaatatgtagatattactgaaacattagcaattgaacgtgctaaagaa
ttattcggtgcagaacatgtaaatgttcaaccgcattcaggttcacaagcaaatatggca
gtttatttagtagcgttagatcatggagatactgtattaggtatgaatttgagccatggt
ggtcatttaactcatggttctccagttaatttcagcggtaagttttataactttgttgaa
tatggagtagataaagaaacagaacgtatcgactatgaagaagtacgtcgccttgcaaaa
gaaaacaaaccaaagttaattgttgcaggcgcatctgcttaccctcgtgaaatcgacttt
aagaaatttaaagaaattgctgatgaagtcggtgctaaattaatggtagatatggcacat
attgctggtcttgtagctgcaggcttacatcaaaatcctgtagattatgctgattttgtt
acaacaacaacgcataaaactttaagagggccacgtggtggtatgattcttactaaagaa
gaatatgcaaaacaaattgataaaacaatcttcccaggtattcaaggtggacctttagag
catgttattgctgcaaaagcagtagcgttcggtgaagctttaaatcctgatttcaaagat
tatcaagaacaagttgtcaaaaatgcaaaagcattagctgatacattgattgaagaaggt
ttcagagttgtatcaggcggtactgataaccacttagttgcagttgacgtaaaaggttca
tttggtattacaggtaaagaagcggaagaagcattagatgaagtgggtattacttgtaat
aaaaacacaattccattcgaccaagaaaaaccatttgtaactagcggtttacgtttaggt
acacctgcagctacaacacgcggattcgaagaagcagattttgaagaagtagctaaaatc
attagcttggttgttcaaaatcctaaagatgaagctaagttgaaagaagcgagtgatcgt
gtagcagcattgacttcaaaacatccattatataaataa
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