Staphylococcus carnosus subsp. carnosus: SCA_2026
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Entry
SCA_2026 CDS
T00863
Symbol
capD
Name
(GenBank) putative capsular polysaccharide synthesis enzyme
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
sca
Staphylococcus carnosus subsp. carnosus
Pathway
sca00541
O-Antigen nucleotide sugar biosynthesis
sca00552
Teichoic acid biosynthesis
sca01100
Metabolic pathways
sca01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sca00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SCA_2026 (capD)
00552 Teichoic acid biosynthesis
SCA_2026 (capD)
Enzymes [BR:
sca01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
SCA_2026 (capD)
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GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
CoA_binding_3
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
adh_short
NAD_binding_4
NAD_binding_10
KR
GFO_IDH_MocA
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
CAL28931
UniProt:
B9DKL0
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Position
complement(2037449..2039332)
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AA seq
627 aa
AA seq
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MSKIPVRQQRLIFFLIIDSLIVAFSVFLSYSILEPYFRGYSLTLLILSSLVLLCSHHIFA
SVFNLYHRAWEYASINEMFVIVKAVTCSMALTVLIVPFFTHEGPFLRLYFITWMMHILLI
GGSRLSWRIFNRTVNRRGRKSKNTLVIGAGAGGSMLVQQMLKRPGMGMEPVLAVDDDPNK
QKLTITEGVKVQGKIEDVPDLVRKYRIKKIIIAIPTLSQKRLREINEICENLGVTVLKMP
NIEEVMSGELEVNQLKKVEVEDLLGRDPVELDMQLISKELTHQTIMVTGAGGSIGSEICQ
QVCRFAPARIILLGHGENSIYLIHQELQKQYGDQIDIVPVIADIQDRSRMFKILDHYQPY
VVYHAAAHKHVPMMEYNPSEAIKNNVMGTKNTAEAARHARVSKFVMISTDKAVNPPNVMG
ASKRAAEMIVQSMNEDNCKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPITVTHPDITR
YFMTIPEAARLVLQAGAIAEGGEVFVLDMGEPVKIVDLAKNLIRLSGYKDGDIEIQFTGL
RPGEKLYEELLDEDEIHPEQVYEKIYRGKVETMKNDDVLRILDEIIHSKDYKQKLIDLAN
HRYEDKNGKIDTADEGNDDIPPFRVIN
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaaaataccagtgagacagcagcgtctgatattctttttaattatagactcgctt
atcgtcgcattttctgtcttcttaagttattcaattctagaaccatattttcgtggttat
tctttaacattacttatattatcttcattagttttactatgttcacatcatatttttgcg
agtgttttcaatttataccatcgtgcatgggaatacgccagtattaatgaaatgtttgtc
atcgttaaagctgtaacgtgttcgatggctttaactgtgcttatcgttccattcttcaca
catgaaggaccatttttaagattgtattttatcacatggatgatgcatattctgttaatt
ggcggttcaagattatcttggagaatattcaatagaacggttaatcgtcgaggtcgaaaa
tctaaaaacactttagttatcggtgcaggcgcaggcggttcaatgctggttcaacaaatg
ttgaaacgtcctggtatgggtatggaacctgtgcttgctgtagatgatgaccctaataaa
caaaaattaacgattactgaaggcgttaaagttcaagggaaaattgaagatgttcctgat
ttagtacgcaagtatcgtattaaaaaaataatcattgcgattccgacattatcgcagaaa
cgattacgtgaaattaatgaaatatgtgaaaatcttggcgttactgtattgaaaatgccg
aatatcgaagaagttatgtctggtgaattagaagttaaccaattgaaaaaggttgaagta
gaagatttgcttggacgtgatccagtggaactagatatgcaattgatttctaaagaatta
acacatcaaacgattatggttactggtgcaggcggttctatcggttcagaaatctgtcaa
caagtttgtcgttttgcccctgctagaattatcttacttggacacggtgagaatagtatt
tatttgattcaccaagaactgcaaaaacaatatggcgatcaaattgatattgttcctgtg
attgctgatattcaagatcgttctcgtatgtttaaaattttagatcattatcaaccgtat
gttgtttaccatgctgcagcacataaacatgtgccaatgatggaatataacccaagtgaa
gctatcaagaacaatgtaatgggtacgaaaaatacggcagaagctgcacgtcatgcaaga
gtcagcaaatttgtaatgatttcaactgacaaagcggtaaaccctccgaatgtgatggga
gcttctaaacgtgctgctgagatgattgttcaaagtatgaatgaggacaattgtaaaaca
gattttgtggctgtacgatttggtaatgtgcttggttcacgcggttctgttattccattg
ttcaaaaaacaaatcgaagcaggcggaccgattactgttacgcaccctgatattacacgt
tactttatgacgattcctgaagctgcacgtttggttttacaagcaggtgcgattgctgaa
ggcggagaggtctttgtactcgatatgggtgaacctgtgaaaattgttgatttagccaaa
aacttaatccgattaagcggatataaagatggcgatattgagattcaatttactggtttg
cgacctggcgagaaattatacgaagagttgttagatgaagatgaaattcatccagaacaa
gtatatgaaaaaatctatcgcggtaaggtagaaacaatgaaaaatgatgatgtattgcgt
atccttgatgaaatcattcatagtaaagattataagcaaaaattaattgacttagctaat
catcgctatgaagataaaaatggaaaaatcgatactgcagacgaagggaacgatgacata
ccaccctttcgtgtaattaattaa
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