Staphylococcus carnosus subsp. carnosus: SCA_2307
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Entry
SCA_2307 CDS
T00863
Name
(GenBank) Superfamily I DNA and RNA helicases
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sca
Staphylococcus carnosus subsp. carnosus
Pathway
sca03420
Nucleotide excision repair
sca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SCA_2307
03430 Mismatch repair
SCA_2307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sca03400
]
SCA_2307
Enzymes [BR:
sca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCA_2307
DNA repair and recombination proteins [BR:
sca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCA_2307
MMR (mismatch excision repair)
Other MMR factors
SCA_2307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
AAA_22
UvrD_C_2
PhoH
ResIII
DEAD
NPHP3_N
IstB_IS21
DUF3685
SLFN-g3_helicase
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CAL29210
UniProt:
B9DJ31
LinkDB
All DBs
Position
complement(2371030..2372562)
Genome browser
AA seq
510 aa
AA seq
DB search
MSIPTLVGHQTEILYVADNQNMVITGSAGCGKSLLAIYRIYWLSKVYPNDRIVLLTFNKA
VNQDMISKIELIAAQRNEAVPNNLIVNTYNLFMKEILNKICDSFQEEELLLNKYKEGKGV
KNYNHYKKKARQVEQAVDEISKKYPDESSFKRPYQTFSDEISWLQQMAVSTLEDYEKIER
IGRRSTRIDRSKRKYFYEVYEKYLENREEDDRYYDFEDIGSLIRNLLEKIEDQDKREKLL
SFKYILIDEFQDFTSDMLMTVNALSDKNGALVLLGDINQGVFGKRISFKSLGINMNSYKK
YKLIQNYRNSRPISELAEEISNSPYFDKSNEFYAEAELGIRKGQDPKIIQYKNEEEEMSK
VYQYINAVETNYKGESICVILPTHKFKDFKSFIEKHGNNFKKYSLTNRESNIIIGTYRQI
KGLEFDTVIMPFLSKKTFLESLTIDNNELDMDKEEFDLTNIGTEILEKYVAQYYVGVTRA
RNKLIILYSGQITPLLDNSSFEKYKKGSEN
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtcaataccaactcttgtgggtcatcaaactgagattttatatgtagctgataatcaa
aatatggttatcactgggagtgcaggatgtggaaaatcattattagctatttacagaata
tattggctctctaaggtgtaccctaatgatagaattgttttgcttacatttaataaagcg
gtaaatcaagatatgatttccaaaatagagcttattgctgcacagcgaaatgaagcagta
cctaataatttgattgttaatacatataatttattcatgaaagaaattttaaataaaatc
tgcgatagttttcaggaagaagagttattattaaataaatataaagaaggaaaaggagta
aaaaattataatcattataaaaagaaagctagacaggttgaacaagctgttgatgagata
agtaaaaagtatccagatgaatcttcgtttaaaagaccttatcaaacattttctgacgaa
atatcgtggctgcaacaaatggcagttagtactctagaagattatgaaaagatagagaga
ataggaagaagaagcactagaatagatagaagtaaaagaaaatatttttatgaagtttat
gaaaaatatttagaaaatagagaagaagacgatagatattatgactttgaggatatcggg
agtttaatacgaaatttattagaaaaaattgaagatcaagataaaagagaaaagttgctg
tcttttaaatatattcttatcgatgaatttcaagatttcacatcagatatgttaatgact
gtaaatgctttaagtgataaaaacggcgcattagtgttgttaggagatattaatcaaggt
gtattcggaaagcgtatttctttcaaatcgctaggtattaatatgaatagttataagaag
tataaattgattcaaaattatagaaatagccgtccaatcagtgagttagctgaagaaata
tctaattcaccatattttgacaagagtaatgaattttatgcagaagctgaattaggaatc
agaaaaggacaagacccaaaaattatccaatacaaaaatgaagaagaagaaatgtccaaa
gtttatcaatatattaatgctgtggagacaaactataaaggcgaaagtatatgtgtcata
cttccaacacacaagtttaaagattttaaaagctttattgaaaaacatgggaataatttt
aagaaatatagtttaactaatcgtgaaagcaacattatcattggaacttatagacaaatt
aaagggttagaatttgatacggttattatgccttttttaagtaaaaaaacttttttagaa
agtttaacgatagataataatgagcttgatatggataaagaagagtttgatcttactaat
ataggcacagaaatactagagaaatacgttgcacagtattatgttggtgttacaagagca
agaaataaacttattattttatactcgggtcaaataacaccattattagacaactcatct
tttgagaaatataaaaaagggagtgaaaattaa
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