Staphylococcus carnosus subsp. carnosus: SCA_2353
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Entry
SCA_2353 CDS
T00863
Symbol
capD''
Name
(GenBank) truncated capsular polysaccharide synthesis enzyme CapD (fragment 2)
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
sca
Staphylococcus carnosus subsp. carnosus
Pathway
sca00541
Biosynthesis of various nucleotide sugars
sca00552
Teichoic acid biosynthesis
sca01100
Metabolic pathways
sca01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sca00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SCA_2353 (capD'')
00552 Teichoic acid biosynthesis
SCA_2353 (capD'')
Enzymes [BR:
sca01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
SCA_2353 (capD'')
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
RmlD_sub_bind
GDP_Man_Dehyd
3Beta_HSD
CoA_binding_3
adh_short
NAD_binding_4
NAD_binding_10
KR
DUF1749
DUF3842
TrkA_N
RHH_8
DXP_reductoisom
Motif
Other DBs
NCBI-ProteinID:
CAL29256
UniProt:
B9DIN1
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All DBs
Position
complement(2422762..2424138)
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AA seq
458 aa
AA seq
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MVVGAGRGGYFLIRQMLTTSNMGLEPVLAVDDDPNKQNISITMGVKVQGYINDIPELVNK
FKIKKIIIAIPTLSQKRLREITELCKNLNVEVLIMPDIESVMTGELEVNQLKKVDVEDLL
GRDPVELDMKMISEELTNKTILVTGAGGSIGSEICRQVCKFAPKKIVLLGHGENSIYLIH
RELLKQYRDEIEIVPVIADVQDRERIMNVMKTHKPYFVYHAAAHKHVPMMEYNPEEAVKN
NVIGTKNAAESAQLAEVSKFVMISTDKAVNPPNVMGASKRIAEMIIQNLNTRPGNTDFVA
VRFGNVLGSRGSVIPLFKEQIAAGGPVTVTHPEMTRYFMTIPEAARLVLQAGALATGGEI
FVLDMGEPVKIVDLAKNLIRLSGFKEEDIDIEFSGVRPGEKLYEELLNEKEIHPEQVYEK
IYRGKVTSVDTESLNRILDILLNHFTKQQIINIANGKY
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
ttggtagtaggtgcaggtcgtggtggttactttttaattcgtcaaatgttaactacatca
aatatgggattagaaccagttttagcggttgatgatgatccgaataaacagaatatctcg
ataactatgggggtcaaagttcaaggttatattaatgatattccagaacttgttaataag
ttcaaaattaaaaaaattattattgctattccaacgttatcgcaaaaaagattaagagaa
attactgaattatgtaagaatttaaatgttgaagttctaattatgcctgatattgaaagc
gtaatgacaggtgaattagaagttaatcaactcaagaaagtagacgttgaagatttgctt
ggacgtgatcctgttgaactcgatatgaaaatgatatctgaagaattgacgaacaaaaca
atcttagtaacgggagcaggtggctctataggatcggagatttgtcgtcaagtatgtaag
ttcgcacctaaaaagatagtacttttaggacatggtgagaacagtatctatttaattcac
cgagaattattgaaacagtacagagatgaaattgaaattgttcctgtcatcgcagatgtt
caagatagagaaagaataatgaatgtgatgaaaacacacaaaccatattttgtatatcac
gctgcggctcacaagcatgtaccaatgatggaatataatccagaagaagcagttaagaat
aatgtaataggaactaaaaatgctgctgagtcagctcaacttgctgaggtaagcaaattt
gtcatgatatcaactgataaagcagtcaatccacctaacgtcatgggagcatcaaaaaga
attgctgaaatgataatccaaaacttaaatacaagacctggaaatacagattttgtggcg
gttcgttttggtaacgttttaggatcaagaggctcagttattcctttatttaaagagcaa
attgcagctggtggtcccgttacagttacccacccagaaatgactcgttactttatgaca
atacctgaagcagctagacttgtattacaagcaggtgctttggcaacaggtggagaaata
tttgtattagatatgggtgaaccagtaaaaattgttgatttagccaaaaatttaattagg
ctaagtgggtttaaagaagaggacatagatatcgaattcagtggtgtcagaccaggtgaa
aaattatatgaagaattattaaatgaaaaagaaattcatcctgaacaagtctacgaaaaa
atttatcgaggaaaagtgacaagtgtagatacggaaagtttgaacagaattctagatatc
ttattaaaccattttacaaaacaacaaattataaatatagctaatggaaagtattga
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