Shewanella carassii: TUM17387_00060
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Entry
TUM17387_00060 CDS
T07543
Symbol
glyS
Name
(GenBank) glycine--tRNA ligase beta subunit
KO
K01879
glycyl-tRNA synthetase beta chain [EC:
6.1.1.14
]
Organism
scaa
Shewanella carassii
Pathway
scaa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TUM17387_00060 (glyS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scaa01007
]
TUM17387_00060 (glyS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scaa03016
]
TUM17387_00060 (glyS)
Enzymes [BR:
scaa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
TUM17387_00060 (glyS)
Amino acid related enzymes [BR:
scaa01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
TUM17387_00060 (glyS)
Transfer RNA biogenesis [BR:
scaa03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
TUM17387_00060 (glyS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
DALR_1
ATF7IP_BD
Motif
Other DBs
NCBI-ProteinID:
BCV64647
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All DBs
Position
complement(7263..9332)
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AA seq
689 aa
AA seq
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MNFDNLLIEIGTEELPPKALRTLAESFVNNFCEELDKAELSYSKAHWYAAPRRLALYIEQ
LALAQQDKVVEKRGPAVSSAFDAEGKPTKAAEGWARGNGISVAEAERLVTDKGEWLLHRA
KVEGVTTESLIPAMAQRALDKLPIPKPMRWGSNKTQFIRPVHTVTMLLGDKLVAGELLGI
TSARTVRGHRFMGEASFELDHADNYLSSLKERGKVIADYQARMNIIKTDAEKAAAELGGR
ADIADELLEEVASLVEWPVVLTAAFEEKFLQVPAEALVYTMKGDQKYFPVFDGNNKLMPN
FIFVTNIESKDPAQIIAGNEKVVRPRLADAEFFFNTDKKQSLESRIASLETVVFQKQLGT
LKDRVERISCVAEAIAAKIEANQADAKRAGLLSKADLMTNMVMEFTDTQGTMGMHYARLE
GETEAVALALEEQYKPKFSGDTVPTAPVSCAVALAEKLDTLSGIFGIGQAPKGAADPFAL
RRAAIGVLRIIVENKLPLDLVELIACAIKAHGSNLSNQNCAEEVLEFLMGRFRAWYQDKG
ISTDVILAVLARRPTRPADFDSRIQAVSHFRSLEQAASLAAANKRVSNILAKVEGELPSE
VDTVLLQEEAEKALNQVLSSLQPQLEPLFAKGEYQQGLTLLSTLKEPVDTFFEDVMVMAD
DEALRRNRLALLNQLRNQFLRVADISLLQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgacaacttactcatagagataggtacagaagagctgccaccaaaagctttg
cgcactctggccgagtcttttgtaaacaacttctgcgaagagctggacaaggccgaactc
agctatagcaaggcacactggtatgccgctccgcgccgtttggcgctctacatagagcaa
ctggctctggcacaacaggataaagtggttgagaaaagaggccctgcagtcagctcggcc
tttgatgccgaaggcaagccaaccaaggccgccgaaggctgggcccgcggcaatggtatc
agcgttgccgaagccgagcgtctggttacagacaagggtgaatggctactgcaccgcgcc
aaggttgaaggtgtgaccactgaaagcctgatcccggccatggcccagcgcgcactggac
aagctgcctatccccaagcctatgcgctggggcagtaacaagactcaatttattcgcccc
gtgcatacagttaccatgttgttgggtgacaagctggttgccggtgagctgttggggatc
acctcggcacgtaccgttcgtggtcaccgctttatgggcgaagccagcttcgagctggat
catgccgacaactacctcagcagcttgaaagaacgcggcaaggtgattgccgactaccag
gccagaatgaatatcatcaagacagacgccgaaaaagccgctgccgagttgggtggccgt
gccgatatcgccgacgaactgcttgaagaagtcgcctccttggttgaatggcctgtggta
ctgacagcggctttcgaagagaagtttttgcaggtgcccgccgaggctctggtctacaca
atgaaaggcgatcagaaatacttcccggtatttgatggcaacaataagctgatgcccaac
ttcatctttgtgaccaatattgagtccaaagatccggcgcaaatcattgccgggaatgag
aaagttgtccgccctcgcctggccgatgccgaattcttctttaatacagataaaaagcaa
tcactcgagtcccgcattgccagcctggaaaccgtggtattccagaagcaattgggcacc
cttaaagacagagtggagcgtatctcctgtgtggccgaggccattgcggccaaaatcgaa
gccaatcaagccgatgccaagcgggccggtctgttgtccaaggccgatttgatgaccaat
atggtcatggaatttaccgacacccaaggcaccatgggtatgcattacgcacgcctcgaa
ggggaaaccgaagccgttgccctggcattggaagaacagtacaagcctaagttctccggt
gatactgtgccgacagcgccggtatcctgcgccgttgcactggcagagaagctggatacc
ctgagcggaatattcggtatcggccaggctcctaaaggcgctgccgacccctttgccctg
cgccgagcggccataggtgtactgaggatcattgttgagaacaaactgccactggatctg
gtcgagctgattgcctgcgccatcaaggctcacggcagcaacctcagcaatcagaactgc
gccgaagaggtgctggaatttctgatgggccgtttccgcgcctggtatcaggataaaggc
atcagtaccgatgtgattctagcggttctggcccgtcggccgacacgtccggccgacttt
gacagccgtatccaggctgtcagccatttccgcagcctggagcaggccgcctctctggcc
gcagccaacaagcgggtttccaatattctcgccaaggttgaaggtgagctgccaagcgaa
gtcgatacagtcctgctgcaggaagaagccgagaaggccctgaatcaagttctgagctca
cttcagccacaacttgagcccttgtttgccaaaggggaatatcaacagggattgaccctg
ctatcgacgctgaaagagccggtagataccttctttgaagatgtgatggtaatggccgac
gatgaggcgctgcgccgcaatcgtctggcactgctgaaccagctgcgaaatcagttcctg
cgggtggccgatatatcactgttgcagtga
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