Shewanella carassii: TUM17387_00240
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Entry
TUM17387_00240 CDS
T07543
Symbol
rsmB_1
Name
(GenBank) ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scaa03009
]
TUM17387_00240 (rsmB_1)
Enzymes [BR:
scaa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
TUM17387_00240 (rsmB_1)
Ribosome biogenesis [BR:
scaa03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
TUM17387_00240 (rsmB_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
Methyltransf_31
Methyltransf_25
Methyltransf_37
Methyltransf_24
Methyltransf_5
MTS
Methyltransf_11
Methyltransf_12
FtsJ
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
BCV64665
LinkDB
All DBs
Position
complement(27505..28797)
Genome browser
AA seq
430 aa
AA seq
DB search
MRQNLRALAAKAIFQVLERGMSLSVALPEQQQQLHSGKDKALLAELCYGVMRTLPQLDKR
VSDCLNKQFKGKQRIVHQLLLVGCYQLYFTRIPAHAAISETAEACRQLKFENLVKVVNGV
LRNIQRDNSPLATDNPVLEHNTPNWILKALTAAYPENWQQVVQQSHQRPPLWLRNNRLSQ
SREQYLQHLADAEIAATPGQGEDSILLEQACDVTSLPGFGEGSVSVQDGAAQWAAALLAP
QAGETILDACAAPGGKSCHLLELCPDIELVAVDNDNKRLRRVAENLQRLQLNAQLVHGDA
ADIASWWQGGQFDRILLDAPCSATGVIRRHPDIMWLRKPQDIEELAKVQQQILDHCWQWL
KPGGVLLYATCSILPQENRDQVAAFLERTPDARLKAITQADQPDAIGWQILPGQDNMDGF
YYARIVKSKL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagacagaatctcagagcccttgccgccaaggccatctttcaggtactggaacggggc
atgtccctctcggttgccctgcccgaacaacaacagcagcttcacagcggcaaagacaag
gcgcttttggccgaactttgctatggcgtaatgcgcaccctgccacaactggacaagaga
gtcagcgactgcctcaataaacagttcaaagggaaacagcgtatcgtccaccagctgctt
cttgtgggttgttaccagctgtatttcacccggataccggcccatgcagccatttcggaa
actgccgaagcctgtcgtcaattgaagtttgaaaacctggtcaaggtagtcaacggcgtt
ttacgtaatatccagcgagacaatagtccactggccacagataaccctgtgctggaacac
aatacgcccaactggatcctcaaggcgctcacagctgcctatccggaaaactggcaacaa
gtggtgcaacagagtcaccagcgaccgcccctgtggctgcgcaacaaccgtttatcccaa
agtcgtgagcaatatctgcaacacttggctgacgccgaaattgccgccactccaggtcaa
ggggaagacagtatattgctcgagcaagcctgcgatgtcacctctctgcccggctttggc
gaaggctcagtatctgtgcaggatggtgcggctcaatgggccgccgccctgctagctcct
caagcgggcgaaaccattctcgatgcctgcgccgctccgggaggcaagagttgccatctg
ctggagctgtgtccggacatagagctggtggcggtcgacaacgacaacaaacggctgcgg
agagttgccgagaacctgcaaaggttgcaactgaatgcccagttggtgcacggcgatgcc
gccgatatcgcgtcatggtggcagggcggccagtttgatcgcatattactggatgctccc
tgctcggctaccggcgttattcggcgccatccggatatcatgtggctgcgtaagccgcag
gatattgaggagttggccaaggtgcagcaacagatattggatcactgctggcaatggttg
aagccaggcggtgtactgttatacgccacctgctctatcctgccccaggaaaaccgcgat
caagttgccgccttcctggaacgtacgccggatgcccgcctgaaggctatcactcaggca
gaccagccagatgcaataggctggcaaatcttgcccggacaggacaatatggacgggttt
tactacgcgcgaatcgttaagtcgaaactttag
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