Shewanella carassii: TUM17387_00720
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Entry
TUM17387_00720 CDS
T07543
Symbol
mutM_1
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
scaa
Shewanella carassii
Pathway
scaa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TUM17387_00720 (mutM_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scaa03400
]
TUM17387_00720 (mutM_1)
Enzymes [BR:
scaa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
TUM17387_00720 (mutM_1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TUM17387_00720 (mutM_1)
DNA repair and recombination proteins [BR:
scaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TUM17387_00720 (mutM_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DUF1631
Motif
Other DBs
NCBI-ProteinID:
BCV64713
LinkDB
All DBs
Position
complement(83425..84240)
Genome browser
AA seq
271 aa
AA seq
DB search
MPELPEVEVTRLGVAPYLVDQTVSNLIVRNPSLRWPVPETARNIIGQTIRAVRRRAKYLL
LDTDAGTCIVHLGMSGSLRILPRSTPAEKHDHIDLELENGRVLRFNDPRRFGAWLWCELP
ETAHPLLAKLGPEPLTDAFNVAQLHAALKGKKKAIKLCLMDNAIVVGVGNIYANEALFAA
GIHPQAEAGKVDKERLTVLVAEIKLILAQAIKQGGTTLKDFTNAEGKPGYFAQKLHVYGR
GGETCTQCGHMLSEIRLGQRTTVFCSLCQTR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattgccggaagtggaagtgacccgcctcggggttgcgccgtatcttgtcgat
cagactgtcagtaaccttatcgttcgtaatccgtcactgcgttggccggtacccgaaacg
gcccgcaatatcataggacagaccatcagagccgtgcgccgccgcgccaaatacctactg
ctggatacagatgccggtacctgcatagtgcatctggggatgtccggtagcctgcggatt
ttgccccgtagcacaccggcggagaaacacgatcatatagatctggagctggaaaacggc
cgggtgctgaggttcaacgatccgcgcagattcggtgcctggctatggtgcgagttgccg
gaaacggcacatccgctgctggccaaactgggccccgaacctttaacggatgccttcaat
gtcgcgcaactgcacgcggcgctcaaaggcaagaagaaggcgataaaactctgtctgatg
gacaatgccattgtggtgggtgttggtaatatctatgccaacgaagccctgtttgccgcc
gggatccacccgcaggccgaagccggtaaagtggataaagagcggctgacagtgctggtc
gccgagataaagctgatcctggctcaggccatcaaacagggcggcaccacattgaaagat
ttcaccaatgccgaaggtaaaccgggttactttgcccagaagctgcacgtctatggccgc
ggtggggaaacctgtacccaatgcggccatatgttatccgaaatacgcctgggacagcgc
actacagtgttttgcagcctgtgccaaacaaggtaa
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