Shewanella carassii: TUM17387_01730
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Entry
TUM17387_01730 CDS
T07543
Symbol
selD
Name
(GenBank) selenide, water dikinase
KO
K01008
selenide, water dikinase [EC:
2.7.9.3
]
Organism
scaa
Shewanella carassii
Pathway
scaa00450
Selenocompound metabolism
scaa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
TUM17387_01730 (selD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scaa03016
]
TUM17387_01730 (selD)
Enzymes [BR:
scaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.9 Phosphotransferases with paired acceptors
2.7.9.3 selenide, water dikinase
TUM17387_01730 (selD)
Transfer RNA biogenesis [BR:
scaa03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
TUM17387_01730 (selD)
Prokaryotic type
TUM17387_01730 (selD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIRS
AIRS_C
DUF6885
Motif
Other DBs
NCBI-ProteinID:
BCV64814
LinkDB
All DBs
Position
complement(189758..190801)
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AA seq
347 aa
AA seq
DB search
MSDQSVKLTEYSHGAGCGCKISPKVLSTILASQLPDFKDPRLLVGNQSRDDAAVYQLDDH
TGIISTTDFFMPIVDDPFTFGRIAATNAISDIYAMGGKPIMAIAILGWPVNKLSPEIAQQ
VVDGGRQACMDAGIMLAGGHSIDAPEPIFGLAVTGTVALEHLKQNDTAKAGDKLYLTKPL
GIGILTTAQKQKKLAPQDVNIAPEAMCQLNKIGAEVAKISTVHAMTDVTGFGLAGHLLEM
CQGANLKASIDTAKLPLLEKASEYLAMGCIPGGTHRNFDSYGEHLPEVSEQQKALLCDPQ
TSGGLLIAVGAEGEAELQQLLTNQGLELHCIGALDHRDDRQQWVELV
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcagtcagtcaaactcacggaatacagccacggcgcaggttgcggttgcaag
atttcccccaaagttctcagcactattttggcctctcagctgccggactttaaagatccc
cgcctgctggtcggcaaccagagccgggatgatgcggcggtctatcagctggatgatcac
acaggcattatcagtactaccgacttctttatgccgatagtcgatgaccctttcaccttc
ggccgtatcgcggcgaccaacgccatcagcgatatctatgccatgggcggcaagcctatt
atggcgattgccattctgggttggccggtgaacaagctgtcacccgagatagcccagcag
gtcgtggatggcggacgccaagcctgcatggatgccgggatcatgttggccggaggccat
agcatagacgcgcctgagcctatcttcggcctggcggtaaccggcacagtggcgctggag
cacctcaagcagaacgataccgccaaggccggtgataagctctatctcaccaagcccttg
ggaattggcatactgaccacggcacaaaagcagaagaagctggcgccacaggatgtcaat
atcgccccagaggccatgtgccaactcaataagataggtgccgaagtcgccaagataagc
acggttcacgccatgacagacgtgacaggctttggtctggcaggccacctgctggagatg
tgtcagggcgccaacctcaaggccagcatagataccgccaaactgccactgctggaaaaa
gcctccgagtatctggccatgggttgtatcccgggtggcacccacagaaactttgacagc
tacggtgagcacctccccgaggtttccgagcaacaaaaagccttactgtgcgatccgcaa
accagcggcggtctactcatcgccgtcggcgccgagggtgaggccgaactgcagcaactg
ctgaccaatcaagggctggagctacactgtataggtgcgctcgaccatcgcgacgaccgt
cagcaatgggtggagctggtatga
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