Shewanella carassii: TUM17387_01760
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Entry
TUM17387_01760 CDS
T07543
Symbol
trmA
Name
(GenBank) tRNA/tmRNA (uracil-C(5))-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scaa03016
]
TUM17387_01760 (trmA)
Enzymes [BR:
scaa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
TUM17387_01760 (trmA)
Transfer RNA biogenesis [BR:
scaa03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
TUM17387_01760 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_4
Methyltransf_25
MTS
Methyltransf_31
Methyltransf_15
Cons_hypoth95
Methyltransf_11
PrmA
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
BCV64817
LinkDB
All DBs
Position
complement(193121..194224)
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AA seq
367 aa
AA seq
DB search
MNLEAMDPSQYDAQLEQKRLKLEQAFARFTPPALEVFPSAPQHYRMRAEFRVWHDGEDLY
YYMFDQQQKAKVRCDQFLPASALINQMMPALMAELRPNCILRHKLFQVDFLSTLSGEILV
SLLYHKQLDDNWLNEATALKQRLEKAFKVDIIGRARKQKFVLDRDFVIERLQVNQQEYIY
KQVENSFTQPNAQVATKMLEWAIDCTRHSSGDLLELYCGNGNFSIALAQNFNKVLATELA
KPSVDSAQYNIEQNGTENLQIIRMSAEEFTQAMTGERSFRRLEGIDLKSYDCNTIFVDPP
RAGLDPDTVNLVQGYESILYISCNPQTLADNLEQLSQTHEIKRFALFDQFPYTDHMEAGV
LLSRKSL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagaagcaatggacccaagtcaatatgatgcgcagctggaacaaaagcgcctc
aaactggaacaggcctttgcccgcttcactcccccagctctggaggtgtttccctctgct
ccacaacactaccgtatgagggctgaattccgggtttggcatgacggggaagatctctac
tactatatgtttgaccaacaacaaaaagctaaggttcgttgcgatcagtttctgcccgcc
agcgcgctaatcaatcaaatgatgccagcactgatggccgagctgcgccccaactgcata
ctgaggcacaagctgtttcaagtagacttcctctctactttgtccggcgagattttggtg
tcactgctgtatcacaagcagttggatgataactggctcaatgaagccacggcgttgaaa
cagaggctcgagaaagcattcaaggtcgacattatcggtcgagcccgcaaacagaagttt
gtgttggacagagatttcgtcatcgaacgtctgcaagtcaaccagcaggaatacatctat
aaacaagtagaaaacagcttcacccagcccaatgcccaagtggcaaccaagatgttggag
tgggcgatagactgtacccgccacagtagtggcgatctgcttgagctttattgtggcaac
ggtaacttctccatcgccctggcacaaaacttcaacaaagtgctggcaaccgagttagct
aaaccctcggtcgattccgctcaatacaatattgagcaaaatggcactgagaatctgcag
atcattcgtatgtcggccgaggaatttacccaggccatgacgggggagcgtagcttcaga
cgtctggaaggaattgacctcaagagttacgactgcaacaccatctttgttgatccaccg
cgagccggcctagatcccgatactgttaatctggtgcagggctatgagtccatcctctat
atttcctgcaacccgcaaaccctggccgataatctcgaacagttgagtcaaactcacgag
atcaaacgctttgccctgtttgatcagttcccctataccgaccacatggaagcgggtgta
ctgctttccagaaaaagcctatag
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