KEGG   Shewanella carassii: TUM17387_02790
Entry
TUM17387_02790    CDS       T07543                                 
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
scaa  Shewanella carassii
Pathway
scaa00330  Arginine and proline metabolism
scaa00480  Glutathione metabolism
scaa01100  Metabolic pathways
scaa01110  Biosynthesis of secondary metabolites
scaa04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:scaa00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    TUM17387_02790 (speF)
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    TUM17387_02790 (speF)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    TUM17387_02790 (speF)
Enzymes [BR:scaa01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     TUM17387_02790 (speF)
SSDB
Motif
Pfam: OKR_DC_1 OKR_DC_1_C OKR_DC_1_N Beta_elim_lyase GKRP_SIS_2
Other DBs
NCBI-ProteinID: BCV64920
LinkDB
Position
complement(305955..308120)
AA seq 721 aa
MKSLKIAASLSVRSCFDTEREVVNVLTTDFCDIGAVVVSVTDVNNGIVDKINNTGLKLPI
FVAVCCEETFPDDICSAITGVFELCASSSTAFYGKQVETALNKYEQALLPPFFGTLKKYV
DMGNSTFACPGHQGGQFFRKHPVGRQFFDFFGETVFRADMCNADVRLGDLLIHEGAPCDA
QKHAAKVFNADKTYFVLNGTSASNKVVCNALLTKGDLVLFDRNNHKSNHHGALIQAGATP
VYLETARNPFGFIGGIDAHCFSENYLREEVRKVDPSRADAKRPFRLAVIQLGTYDGTIYN
ARQVVDKIGHLCDYILFDSAWVGYEQFIPMMNDCSPLLLELSAEDPGILVTQSVHKQQAG
FSQTSQIHKKDSHIKGQDRYCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGASGRF
LWREAVKAGIEARKLLLKKCKYIKPFIPPMIEGTPWQDHETEQMADDLRFFEFEPGQKWH
AFEGYEKGQYFVDPCKFLLTTPGIDAETGKYTNFGIPATILANFLRENNIIPEKCDLNSI
LFLITPAENMAKMQHLVSQIARFEKLVDEDAPLSEVLPNVYNANKERYQGYTIRQLCQEM
HDLYVSHDVKQLQKEMFRQAHFPKAVMNPQEANIEFIRGNVELVPLSQVEGRIAAEGALP
YPPGVLCVVPGEIWGGAVQRYFLALEEGINLLPGFSPELQGVYLEQTPEGRQQAMGYVLK
A
NT seq 2166 nt   +upstreamnt  +downstreamnt
atgaaatcattaaaaattgcagcaagtttatctgttcgctcttgttttgatactgaaaga
gaagttgtcaacgtattaactaccgacttttgcgatattggtgccgtggttgtttcagtc
acagatgtgaataacggcatagtcgacaaaatcaataatacaggcctgaaactgcccatt
ttcgtcgccgtatgttgtgaagaaaccttccccgatgatatctgctctgccattaccggc
gtattcgagctttgcgccagcagcagtaccgcgttttacggcaaacaggtagaaaccgcg
ctcaataaatatgagcaggcgctgctgccacctttcttcggcacgctgaaaaagtatgtc
gatatgggtaactctacctttgcctgcccaggacaccaaggcggtcagttcttccgtaag
cacccggttggtcgccagttttttgatttctttggcgaaacagtattccgcgctgacatg
tgtaacgccgacgtcagactgggcgacctgctgatccacgaaggcgccccctgtgatgcg
cagaagcatgccgccaaagtattcaatgccgacaagacttactttgtcctcaacggcact
tcagcctccaacaaggtggtgtgtaatgcactgctgaccaagggcgatctggtactgttt
gaccgcaacaaccataagtcaaaccaccacggcgcgctgatccaggccggagctaccccg
gtttatctggaaacggcccgtaaccccttcggctttatcggcggtatcgatgcccattgt
ttcagcgaaaactatctgcgcgaagaagtacgcaaggttgaccccagccgtgccgatgcc
aagcgccccttccgcctggcggtgatccagctgggtacctacgacggcaccatatataac
gcccgtcaggtcgtggacaagataggccacctgtgtgactacatattgtttgactccgcc
tgggtgggctatgagcagtttatccccatgatgaacgactgttcaccgctgttgctggag
ctgagcgcagaagatccggggatcctggtgacccagtcggtacacaaacagcaggccggt
ttctcacaaacctcgcaaatccacaagaaagacagccatatcaagggccaggacagatac
tgcaaccataaacgtttcaacaacgcctttatgttgcacgcctccaccagccccttctac
ccgctgtttgccgcactggatgtcaacgccaagatgcacgaaggcgccagtggccgcttc
ctatggcgtgaggcggtgaaagccggtatcgaagcccgtaaactgctgctgaaaaagtgc
aaatatatcaagccgttcattccgccaatgatagaaggtaccccatggcaggatcatgaa
accgaacagatggccgatgacctgcgcttcttcgaattcgaacccggtcagaaatggcat
gccttcgagggatatgagaaaggccaatacttcgtcgacccttgtaagtttctgctgacg
actccgggtatcgatgccgaaaccggcaagtacaccaacttcggtattccggcaacgatt
ctggccaacttcctgcgtgaaaataacatcattccggagaagtgcgacctcaactcgatt
ctgttcctgatcaccccggccgaaaacatggccaagatgcagcatctagtatctcagatt
gcccgcttcgagaagctggtcgatgaagatgcgccgctgtctgaagtgctgcccaatgtc
tacaacgccaacaaggaacgctatcagggttacaccatacgccagctgtgtcaggagatg
catgatctctatgtcagccatgatgtaaaacagctgcaaaaagagatgttccgtcaggcc
cacttccccaaagccgtgatgaacccacaggaagccaacatagagtttatccgcggcaat
gtggagctggtgcccctgtcacaggtggaaggtcgcatcgcggccgaaggcgccctgcct
tatccaccgggagtgctctgtgtggttcccggcgagatctggggtggcgcggttcaacgt
tacttcctcgccctggaagaagggatcaatctgctgccggggttctcacctgagctgcag
ggcgtgtatctggaacaaacccctgaaggccgacaacaagccatgggctatgtcctgaaa
gcttaa

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