Shewanella carassii: TUM17387_03320
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Entry
TUM17387_03320 CDS
T07543
Symbol
slmA
Name
(GenBank) nucleoid occlusion factor SlmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scaa03000
]
TUM17387_03320 (slmA)
03036 Chromosome and associated proteins [BR:
scaa03036
]
TUM17387_03320 (slmA)
Transcription factors [BR:
scaa03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
TUM17387_03320 (slmA)
Chromosome and associated proteins [BR:
scaa03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
TUM17387_03320 (slmA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
HTH_11
HTH_Tnp_1_2
DUF6262
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
BCV64973
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All DBs
Position
complement(364117..364710)
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AA seq
197 aa
AA seq
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MAVKEKINRREHILQSLARMLETNPGQRITTAKLASEVGVSEAALYRHFPSKARMFEGLI
EFIEDSLLSRINLIMDEEKDTMKRCQQALQLLLVFAERNPGISRVLSGDALLGENERLRE
RINLLFAKLETHLKQILREKSLREGQKFALDEAILANLLLAVAEGRIAQFVRSEFKLKPT
AHFEEQWQFIQSQLLQS
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaaaagaaaaaatcaatcgtcgtgaacacatactccaatcccttgccagaatg
ctggaaaccaatccggggcaaaggattaccactgccaagttggcctcggaagttggcgtg
tcggaagcggcgctctatcgccactttcccagcaaggcgcggatgtttgaaggcctgatt
gagtttattgaagactctctgctgtcacgcatcaacctcatcatggatgaggagaaagac
accatgaaacgctgccaacaggcactgcagctgttattggtgtttgccgagcgcaaccca
gggatctcccgggttctgagcggtgatgccctgctgggcgaaaatgagcgtctcagagaa
cggatcaatctgttgtttgccaagttggaaacccatctaaagcagatcctgcgggaaaag
tccctgcgagaagggcaaaaattcgccctggatgaagccattctggcaaatctgctgttg
gcggtggccgaaggtcgcattgcccagtttgttcgcagtgaattcaagctcaagccaacg
gctcacttcgaggagcagtggcagtttattcaaagccagttattgcagagctga
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