Shewanella carassii: TUM17387_03620
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Entry
TUM17387_03620 CDS
T07543
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
scaa
Shewanella carassii
Pathway
scaa00470
D-Amino acid metabolism
scaa00550
Peptidoglycan biosynthesis
scaa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TUM17387_03620 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TUM17387_03620 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scaa01011
]
TUM17387_03620 (murD)
Enzymes [BR:
scaa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
TUM17387_03620 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
scaa01011
]
Precursor biosynthesis
Amino acid ligase
TUM17387_03620 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
KR
UBA_BIRC2-3
Motif
Other DBs
NCBI-ProteinID:
BCV65003
LinkDB
All DBs
Position
396425..397741
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AA seq
438 aa
AA seq
DB search
MSRCSHIVLGLGATGLSVVRYLVAQGLAPMVMDSRRNPPGAEALKNEFPDLEFCFGGFDC
RGLVQAEQIIISPGVPMDTPEVRAALDMGIEVIGDVELFARAIADKGPCVLAITGSNGKS
TVTTLVGEMLKAGGKQVAIGGNIGVPALELLGENVSHYVLELSSFQLETTHSLKCLAATC
LNISEDHMDRYSDLEAYRQAKLRLYELSRLAIFNRDDPQTQPTSPMNNNSFGLGNPEGDE
WGITDGKIFHGSSEIMNLMDVALLGSHNHSNLLAAMALADAAGVDKEAMARVAREFKGLP
HRCELVAVKNGATWLNDSKATNVGATVAALEGLSDYLGDVILIAGGDGKGADFRPLASAL
GTVTHLITLGRDGDKIAALKEDAIKVGSMAEAVSKAAELASSGDIVLLSPACASLDMYSN
FMARGDDFRQLVEALDEQ
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgctgttcgcacatagtgttgggattgggggccacaggcttgtctgtggtgcgc
tatctggtggctcaggggcttgcccctatggtgatggatagtcgccgcaatccacccggt
gccgaggcgctgaaaaatgagtttccggatctggagttttgcttcggtggttttgattgc
cgtggtttggtgcaggcggagcagattattattagtcccggagttcccatggatactcct
gaggttagggcggcgttggatatgggcatagaagtgattggcgatgtggagttgtttgct
cgcgctatcgctgacaagggcccatgtgtgctggcgattaccggctccaatggcaagtcg
acagtgactaccctggtcggtgaaatgctcaaagccggcggcaagcaggtggctatcggc
ggcaacataggggtaccggcgctggagcttttgggcgaaaacgtcagtcactatgtgctg
gagctgtccagtttccagttggagaccactcatagtctcaaatgtttggcggcaacttgc
ctgaacatttctgaagaccacatggacagatacagcgatctggaagcctatcgtcaggcc
aaactgcggctctatgagctgagccgactggcgattttcaaccgggatgatccgcaaacg
cagcccacgtcacccatgaacaacaacagctttggtctgggtaaccccgaaggggatgag
tgggggatcaccgatggcaagattttccacggcagcagtgaaatcatgaatctaatggat
gtggcgctgcttggcagccataaccattccaacttgctggctgccatggcgttggccgat
gcggccggagtagataaggaagccatggccagagtggctcgcgagttcaaggggctgccg
cacagatgtgaactggtagccgtcaagaatggcgccacttggctcaacgattccaaggcc
accaatgtgggcgctaccgtggcggctctagaagggctcagtgactatctcggtgatgtg
atcctgatcgcaggtggcgatggtaaaggagccgatttccggccgttagccagtgcgctg
ggtacagtgactcaccttattaccctggggcgagacggtgacaagatagcggcactgaaa
gaggacgccatcaaggtcggctccatggcagaagccgtgagcaaggccgccgagctggcg
agttccggagacatagtcttattgtcaccggcctgcgccagcctagatatgtacagcaac
tttatggccaggggcgatgatttccgccaactggtggaggcactggatgagcagtga
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