Shewanella carassii: TUM17387_03780
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Entry
TUM17387_03780 CDS
T07543
Symbol
pilC
Name
(GenBank) type II secretion system protein F
KO
K02653
type IV pilus assembly protein PilC
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
scaa02044
]
TUM17387_03780 (pilC)
02035 Bacterial motility proteins [BR:
scaa02035
]
TUM17387_03780 (pilC)
Secretion system [BR:
scaa02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
TUM17387_03780 (pilC)
Bacterial motility proteins [BR:
scaa02035
]
Pilus system
Pilus assembly proteins
TUM17387_03780 (pilC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
Motif
Other DBs
NCBI-ProteinID:
BCV65019
LinkDB
All DBs
Position
complement(427108..428376)
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AA seq
422 aa
AA seq
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MATATAAAKNNKTKKKGAKAQPQIYTFTWKGLNRDGKQSSGELRGASIAEIKTLLKSQGI
NPKTVRKKSASLFGGDKKIKAMDIAVITRQIATMLAAGVPLVTSIELIARGHEKNRMRVL
LGTVLADVQAGIPLSDALRPHRVYFDDLYVDLVAAGEHSGSLDAVFERIATYKEKAEALK
SKIKKAMFYPAAVVVVAIAVTVLLLLFVVPQFESIFAGFGAELPAFTQLIVNISRALQST
WYIFLAAIVISVWLFVRAHRNSEHFRNRIDEMVLKIPLIGEILHKGAMARFARTLATTFA
AGVPLIDGLESAAGASGNYVYRKALLNVRTEVMAGMQMNVAMRTTRLFPDMLIQMVMIGE
ESGSLDNMLNKIANIYEMQVDDAVDGLSSLIEPIMMVVIGTLVGGLIVGMYLPIFQMGNV
VG
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcaacggcggcagccaaaaacaataaaaccaagaagaaaggtgccaaggct
caaccccagatctatacctttacctggaaggggctcaaccgcgacggcaagcaaagctcc
ggcgagttgcgcggtgccagcatagccgaaatcaaaaccctgctaaaaagtcaggggatc
aaccccaagacggtacgcaaaaaatcggcttcgctgtttggtggcgataaaaaaatcaaa
gcgatggatattgcggtgatcacccgccagatagccaccatgctggccgccggggtgccc
ctggtaacctccatcgaactgatcgcccgcggccatgaaaagaataggatgcgggttctg
ctgggcacagtgctggccgatgttcaggccggtattcccctttccgatgccctgcgtcct
catagagtctattttgatgacctttatgtcgacttggtcgctgccggtgaacactccggc
tcactggatgcagtctttgaacgtattgccacttacaaggaaaaggccgaggcgctcaag
tccaagatcaaaaaggccatgttctatccggcggccgtggttgtggtagccatcgccgtg
accgtactgttgctgttgtttgtggtaccccaatttgaaagcatatttgctggctttggt
gccgagctgcccgcatttacccagttgatagtcaatatcagccgcgccctgcagagtacc
tggtatattttcctggcggccattgtcatcagtgtttggctatttgtgcgcgcccatcgc
aactctgagcatttccgaaaccgtatagatgaaatggtgcttaaaattccattgataggt
gaaattcttcataaaggggccatggcccgtttcgcccgcaccttggccacaacctttgcc
gccggtgtacctctgatcgatggcttggagtctgccgccggggcttcgggtaactatgtc
taccgcaaggcgctgttaaatgtgcgtaccgaagtgatggcagggatgcagatgaacgtg
gcgatgcgcaccaccaggctgtttccggatatgctgatccagatggtgatgataggcgaa
gagtccggctcactggacaatatgctcaacaagattgccaatatctatgagatgcaggtg
gatgatgccgttgatggcctctccagcctgattgaacctattatgatggtggttatcggc
accctggtaggggggctaatcgttggtatgtacctgcctatcttccaaatgggtaacgtg
gtaggttaa
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