Shewanella carassii: TUM17387_04100
Help
Entry
TUM17387_04100 CDS
T07543
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
scaa
Shewanella carassii
Pathway
scaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TUM17387_04100 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scaa03400
]
TUM17387_04100 (priA)
Enzymes [BR:
scaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TUM17387_04100 (priA)
DNA repair and recombination proteins [BR:
scaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TUM17387_04100 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
Helicase_C
ResIII
Zn_ribbon_PriA
WHD_PriA
AAA_30
DUF5816
iSirtuin
TrwB_AAD_bind
Zn_ribbon_6
AAA_19
DUF2321
Motif
Other DBs
NCBI-ProteinID:
BCV65051
LinkDB
All DBs
Position
complement(473830..476025)
Genome browser
AA seq
731 aa
AA seq
DB search
MPQFVEVALPVPMRQNFSYLMPKACPWPLEPGMRVRVPFGRQQLIGLVTSLSDECELEPK
QLKPVYQVLDSEPLLPPALYQLTLWAARYYFCSQGQMLTQALPVALRKGADAAPEKISYL
CLTSAGQEATLESLKRAPAQRKLLQQLKQGELTTEEVNALELSKSAIKGLLDKGWAEQRE
RSVSANLEWRQKLELGEEPHRLNPEQAVAVASLNAQSGYQCSLLEGITGSGKTEVYLAVL
ETILKAGKQALILVPEIGLTPQTINRFKRRFKVTVAVIHSGLTDKQRLDAWRLARSGEAA
IIIGTRSALFTPMAWPGIIILDEEHDSSFKQQEGVGYHARDLAVMRGHLEQVPVLLGSAT
PSLESLQNALSGRYQHLQLGERAGNALKVRQGLIDIRNQPLQAGMSQPLLNEMRLHLQAG
NQVLLFLNRRGFAPALLCHECGHLHECDRCDAFFTLHQSLGEIRCHHCGNQYAIPRQCHN
CGSTMLQGQGIGTEQLEAALSKEFPEYPVVRIDRDTTSRKGSLEQHLSAIHRGEYKILVG
TQMLAKGHHFPDVTLVGLLDVDGALFSADFRAPERFGQLYTQVAGRAGRASKPGTVLLQT
HQSDNPLLRDLLHRGYGEFARSQLNERQQALLPPAWHMVLIRAESHRAEDADAFLAAFAA
MLPMDKDFEVIGPLPAPLDRKAGKYRRQLLAQAKDRRRLQQVFEQLLPQAEQLPEAKRCR
WSLDRDPQDLL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagtttgtagaagttgcccttcccgttcccatgcggcagaacttcagttacctg
atgcccaaagcttgcccctggccactcgagccgggaatgcgggtgcgggtgccctttggc
cgccagcaactcataggcctggtgacaagcctgagtgatgagtgcgagctcgagcccaaa
caactcaagccggtatatcaagtgctggacagcgagccattgctgccaccggcgctgtac
caactaaccctctgggccgccagatactatttctgcagccaggggcagatgttgacccaa
gccctgccggtggcgctgcgcaagggtgccgatgccgcgccggagaaaatcagttatctg
tgtctgaccagtgcgggccaggaggccacactggagtcgctgaaacgcgctcccgcccaa
cgcaaactgctgcaacagctcaaacagggggaactgaccactgaagaggtcaatgcgctg
gagctgagcaagagtgccatcaaggggctgctggacaagggctgggccgagcaacgagag
cggtcagtcagcgccaatcttgaatggcggcaaaagcttgaactgggggaagaacctcac
aggctcaacccggagcaagccgtggcggtcgccagcctcaatgcacagagcggctatcag
tgcagcttgcttgaagggatcacaggctcaggcaagacagaggtctacctggcggtactg
gaaaccatactcaaggctggcaagcaggcgctgatcctagtgccggaaatcggcctgacg
ccgcaaaccatcaacaggttcaaacgcagattcaaagtcacggttgccgtgatccattcc
ggcctgaccgacaagcagcgcctcgacgcctggcgcctggcccgcagcggtgaggcggcc
atcataatcggcacccgctcggcgctgttcacccccatggcctggcccgggatcatcatt
ctcgatgaggaacacgacagcagtttcaaacagcaggaaggcgtgggttatcacgcccgg
gatctggccgtcatgcgcggtcacctggagcaggttcctgtgctgctaggcagcgcgacg
ccgtcgctggagagcctgcaaaacgccctcagcggccgctatcaacatctgcaattggga
gagcgggccggcaatgccctcaaggtgcgtcagggactgatagatatccgcaaccaaccg
ctgcaggcgggcatgtcgcaaccgctgctgaacgagatgcgcctgcatctgcaggccggt
aaccaggtgttgctttttctcaatcgccgcggctttgccccagccctgctgtgccacgaa
tgtggccatctgcatgagtgcgatcgctgtgatgcgtttttcaccctgcaccaatccctc
ggcgaaattcgctgccaccactgcggcaaccaatacgcgattccacgccagtgccacaac
tgcggcagcaccatgttgcagggtcagggcataggtacggagcaattggaggcggcgctc
agcaaggagtttcccgagtatcccgtggtgcgaatcgaccgggataccaccagccgcaaa
ggctcactggaacagcacttaagcgccattcatcgcggcgaatacaagatattggtaggc
acccagatgttggccaagggacatcactttcccgatgtcaccctggtggggctgctggat
gtagatggcgccctgttcagcgccgattttcgagctccagagcgcttcggccaactctat
acccaggtagccggtcgcgccggtcgcgccagcaagccaggcactgtgctactgcagact
catcagagcgataaccccttgctcagggacctgcttcacagaggctatggcgagtttgcc
cgcagccagctcaatgagcgccagcaggcactgttacccccggcctggcatatggtgctg
atccgcgccgaatcacaccgcgccgaggatgccgatgcctttctggcggcctttgccgcc
atgttacccatggacaaggattttgaagtgataggcccgctgccagcgccgctggatcgc
aaggccggcaagtatcggcgccagttgttggcccaggccaaggacagacgcaggctgcaa
caggtgtttgaacagctgttgcctcaggccgaacagctacccgaggccaagcgctgccgc
tggagtctggatcgagatcctcaggatctgttgtaa
DBGET
integrated database retrieval system
