Shewanella carassii: TUM17387_05440
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Entry
TUM17387_05440 CDS
T07543
Symbol
rimK1
Name
(GenBank) putative alpha-L-glutamate ligase 1
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scaa03009
]
TUM17387_05440 (rimK1)
Ribosome biogenesis [BR:
scaa03009
]
Prokaryotic type
ribosomal protein modification factors
TUM17387_05440 (rimK1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
GSH-S_ATP
ATP-grasp_3
ATPgrasp_ST
Dala_Dala_lig_C
R2K_3
Motif
Other DBs
NCBI-ProteinID:
BCV65185
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Position
602426..603379
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AA seq
317 aa
AA seq
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MPPLLLGHNSLADLSNMKIGILSQFPELYSTRRLVEACEGRGHQARVINPLNCYMNINSV
QPSIHLEGEELAGFDAIIPRIHASVTFYGCALVRQFEMMGVYAANDSISIARSRDKLRAL
QLLSRKGVGMPVTGFASKPDDIPDLIAMVGGAPLVIKLLEGTQGIGVVLAETKKAAESVI
EAFLGLKANILVQEYIKEANGSDIRCFVVGDKVVAAMKRQGPEGDFRSNLHLGGSAEKIK
ITPQERKTAIDAVKAMGLAVAGVDILRSERGALVLEVNSAPGIEGIELTTGIKVAEPIVE
HIEKMVAARKRNRPVIA
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgccacctcttttgctgggccataactctttggcggatctctcaaacatgaaaatcggt
attctctctcaatttccagagctttattctacccgcaggctggtggaagcttgtgaaggg
cgcggccatcaggcccgggtgatcaatccgcttaactgttatatgaatatcaattcggtg
cagcccagtattcatctagaaggtgaagagcttgccggttttgatgccattatcccgagg
atccatgccagtgtgactttttacggctgtgccctggtacgccagttcgagatgatgggg
gtatacgccgccaatgactctatctccatagcccgctcaagggataagctgcgggcactg
cagttgctctctcgcaaaggggtgggtatgccggtcactggctttgccagcaagccggat
gatattccggatctcatcgccatggtgggtggggcgccgctggtgattaagcttttggag
ggcacccagggaatcggcgtggtgctggccgaaaccaaaaaggccgccgagagcgtgata
gaagcctttctggggcttaaggctaacattctggtgcaggaatatatcaaagaagccaac
ggcagtgatatccgctgcttcgtggtgggtgacaaggtggttgcggccatgaagcgtcag
gggcctgagggagattttcgttccaatctgcatttgggtggtagcgccgagaagatcaag
attacccctcaggaacgcaagaccgccattgatgcagtcaaggcgatggggttggccgtg
gccggggtggatattcttcgctccgagcgcggcgccttagtgcttgaggtcaattcggct
cccggtatcgaaggtatagagctgaccacgggtatcaaggtggccgagccgatagtggag
catatcgaaaaaatggttgccgcccgtaaacgcaatcgtccagtcatcgcctga
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