Shewanella carassii: TUM17387_05580
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Entry
TUM17387_05580 CDS
T07543
Name
(GenBank) mechanosensitive ion channel protein
KO
K03442
small conductance mechanosensitive channel
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scaa02000
]
TUM17387_05580
Transporters [BR:
scaa02000
]
Other transporters
Pores ion channels [TC:
1
]
TUM17387_05580
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Ortholog
Paralog
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MS_channel_1st_1
GNAT_acetyltran
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-ProteinID:
BCV65199
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Position
complement(614512..616131)
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AA seq
539 aa
AA seq
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MVRTLLLVLCLSLSWQSFASEPEPLATEQLTLMQQTIKQNIQQLRSAKGELKAVTEFRIK
ALTLAQRNKLKESIDAIGDKNADPQALMSVLPHLEAQRQLLQQMVQYLDKEIVALQGKLG
KGEDQRLMLEISRRSLEKDEIQKGLLELLNWSEQLGQDVSQAKDSLKQHLIVRAELLESL
VSYNQQQLGVQMAENALAGKDVSSEQNKALTLLKERLENNSSSLSAVIGMLDKLDVDTSD
LKKTLFAISGDITQDVLNIDVVSSLAGQWLDIAKAQLIEGGPDMLFKIFIFLFILLLTGL
LAKLTKRIVAKAVSNSKLKFSKLLQDFFTSLSGKVIFTLGLLIALSQLGFELGPLLAGFG
IAGVIIGFALQDTLSNFASGMMILIYRPFDVGDLINAAGVTGRVSHMSLVSTTIKTLDNQ
RLIVPNNKIWGDTINNITAEHHRRVDMTFGISYSDNIEKAEAVLEQLVQEHPKVLKHPEP
TVKLHLLGESSVDFVVRPWVRPEDYWEVYWDITRAVKMRFDEEGISIPFPQRDVHFYRG
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggttagaactctcttactggtgttgtgtttatccctctcctggcaatcctttgcatct
gaacctgaaccactcgccaccgagcagctcactttgatgcagcaaaccataaaacaaaat
attcaacagcttcgcagcgccaagggcgaactcaaggcggtaacggagtttaggatcaag
gcgctgactctggcgcaaagaaataagctcaaagagagcattgatgccattggcgacaag
aatgcagaccctcaggccctgatgagcgttctgccgcacctggaggcgcagcgacaactg
ttgcagcaaatggtgcaatatctcgacaaggagatagtggcgctgcagggcaaactcggc
aaaggggaagatcaacggctgatgcttgagatctcccgccgcagcctggaaaaggatgaa
attcaaaaaggcttgctggaactgctcaattggtctgaacaactggggcaggatgtcagc
caggcgaaagactctctcaaacaacatcttatcgtcagagccgagttgttggagagcctg
gtgagctacaaccagcagcagttgggggttcaaatggccgaaaatgctttggcgggcaaa
gatgtcagcagcgagcagaacaaggccttgaccctgctgaaagagcggctagaaaataac
agcagcagcctgagcgctgtaattggcatgctggataaactggatgtggataccagcgat
ctgaaaaagaccctgtttgccatctccggggatatcactcaggacgtcctcaatatcgat
gtcgtctccagcctggccggacaatggctcgatatcgctaaggcgcagctgattgaaggc
gggccggatatgctgttcaagatatttatcttcttgtttatcctgctacttaccggcttg
ctggccaaactgaccaagcgaatcgttgccaaggcggtcagtaactccaagctcaagttc
agcaagctgctgcaagatttcttcacctcgctttcaggcaaggtcatctttactttgggc
ttgttgatcgccttgtcacaactggggttcgaactcgggcctctactggccggtttcggt
attgccggggtgattatcggttttgcgctgcaagataccctatccaacttcgcctcaggg
atgatgatccttatctatcgccccttcgatgtgggagatctgatcaatgccgccggggtc
actggccgagtcagccatatgagcctggtttctaccaccatcaagaccctggacaaccaa
cgactgattgttcccaacaacaaaatttggggcgataccattaacaatatcaccgccgag
catcacagacgggtagatatgaccttcggcatcagttacagcgacaatatcgaaaaagcc
gaagccgtgttggagcaactggtgcaagagcatcccaaggtactgaaacaccctgagccc
acggttaaactgcacctattgggtgaatcctcggtggactttgtagtgcgcccttgggtc
aggccggaagattattgggaagtttactgggacattacccgggcggtgaagatgcgcttc
gacgaggaagggatcagcattccattcccgcagcgggatgtacacttctaccgcggttaa
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